| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1915 |
|---|
| Symbol | |
|---|
| ID | 4278827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2264894 |
|---|
| End bp | 2266537 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638134699 |
|---|
| Product | phosphoglucomutase |
|---|
| Protein accession | YP_750599 |
|---|
| Protein GI | 114563086 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0033] Phosphoglucomutase |
|---|
| TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.061293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCATTC ATCAACGCGC AGGACAGCAA GCTTTACAAA CGGATTTAGT GAATATTCCT
AAATTGATGA GTCATTATTA TCGCATTATT CCCAATGTGG AAGACGTGCA ACAAAAAGTG
ACATTTGGTA CATCGGGTCA TCGAGGCAGT GCGTTTTTAT CCAGTTTCAA TCAAAATCAC
ATTTGGGCCA TTACCCAAGC TGTAGTCGAT TATCGCCATT CAGCCAATAT TAGCGGGCCA
ATGATTGTGG GGTTTGACAC CCATGCTTTG TCTTATGCAG CATTTATGTC TGTGGTCGAA
GTATTAACGG CTAACCAAGT TAAAATGTTA ATTCAACAGC ATGATGGTTT TACTCCAACA
CCAGTAGTGT CTCAAGCGAT TGTTCGTGCA AATTCCTCAG CACCTGCTGC GTTAATCGAT
GGGTTAATTA TTACTCCTTC GCACAATCCT CCACAAGATG GTGGCATTAA GTACAATCCA
CCTCATGGTG GCCCAGCTGA AGGTGAAATT ACTAAACTCA TCGAAACCAA AGCCAATGAA
TATTTAGCCA ATCAGCTTTC AGGGGTTAAA AAAGTCAATT ATGGCGTCGC CGTTAAGTCG
GGTTGGATTG ATGAAGTCGA TTTTATTGCA CCTTATGTTG AATCTCTTGC TGAAGTCATT
GATATGGATG CCATTAAAAA AGCCAATATT CGTATAGGTG TCGATCCTCT GGGTGGTTCG
GGTATTTACT ACTGGGAGAA AATTGCCGCT AAATATGGTG TAGATATTAC CTTAGTCAAT
GACAAAGTTG ATCCCACATT TGGTTTTATG CCATTAGATA AAGACGGAAA AATTCGAATG
GATTGCTCGT CTCCTTATGC CATGGCAGGT TTGTTAGCGT ACAGCGAAGA TTATGATTTG
TGCGTCGGTA ATGACCCGGA TTATGACCGT CACGGTATTG TTTGCCCAGG CTTTGGGCTG
ATGAACCCTA ATCATTATTT GGCGGTAGCG ATAGATTATT TAATGACTCA TCGTCCGCAA
TGGTCTGAGT CACTGGCTGT GGGTAAAACC TTAGTATCGA GTGCAATGAT TGATCGTGTG
TGTAACGCCT TAGGTCGACA ATGCTTAGAA GTGCCTGTGG GCTTTAAATG GTTTGTTGCT
GGTTTAGCAA ATAGCACGAT TGCTTTTGGT GGCGAAGAAA GTGCTGGTGC AGCGTTTTTA
AAACGTGACG GCAGTACCTG GTGTACTGAT AAAGACGGCT TTATTTTAGC ATTACTAGCG
GCTGAGATTT TAGCCGTAAC AGGCAAAACA CCTGCACAAC GCTATAAAGA GTTAACCGAT
CAATTTGGCG AAAGTTTTTA CACTCGTATC GATAGCCCAA TTAGTCTTAA GAAAAAAGCT
AAGTTTGAAC AGTTAAATCG TGACAGCTTT ACCGACACAG AATTAGCGGG TGAGGCGATT
ACAGCAATAT TAAGTCATGC ACCAGGTAAT AATGCTGCGA TAGGTGGTAT TAAAGTGACC
ACTGAGAATG GCTGGTTTGC TGCGCGTCCA TCGGGTACTG AAGCCTTATT TAAAATCTAT
GCTGAAAGCT TTATTAGTCA GCAACATTTG GATGAGATTA TTGCTCAAGC GCAGACAATG
ATTGATGGAG CTCTAAAAGG CTAA
|
|---|
| Protein sequence | MAIHQRAGQQ ALQTDLVNIP KLMSHYYRII PNVEDVQQKV TFGTSGHRGS AFLSSFNQNH
IWAITQAVVD YRHSANISGP MIVGFDTHAL SYAAFMSVVE VLTANQVKML IQQHDGFTPT
PVVSQAIVRA NSSAPAALID GLIITPSHNP PQDGGIKYNP PHGGPAEGEI TKLIETKANE
YLANQLSGVK KVNYGVAVKS GWIDEVDFIA PYVESLAEVI DMDAIKKANI RIGVDPLGGS
GIYYWEKIAA KYGVDITLVN DKVDPTFGFM PLDKDGKIRM DCSSPYAMAG LLAYSEDYDL
CVGNDPDYDR HGIVCPGFGL MNPNHYLAVA IDYLMTHRPQ WSESLAVGKT LVSSAMIDRV
CNALGRQCLE VPVGFKWFVA GLANSTIAFG GEESAGAAFL KRDGSTWCTD KDGFILALLA
AEILAVTGKT PAQRYKELTD QFGESFYTRI DSPISLKKKA KFEQLNRDSF TDTELAGEAI
TAILSHAPGN NAAIGGIKVT TENGWFAARP SGTEALFKIY AESFISQQHL DEIIAQAQTM
IDGALKG
|
|---|
| |