Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1913 |
Symbol | |
ID | 4278825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2263134 |
End bp | 2263907 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134697 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_750597 |
Protein GI | 114563084 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000359899 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTATG TATCTTCTGG TCAAGGTGAA GCTGTCCTAC TTATTCATGG GCTTTTTGGT AATCTTGATA ATCTAAAAAA TCTCGGCAGT GTTCTTCAGC AGCAACATCA AGTCATACGG GTTGATGTGC CTAATCATGG ATTAAGCGAG CATTGGGACA ACATGGATTA CCCCCAACTT GCTGATGCCA TGATTGATGT ACTCGATGAT TTACACATCA AACAAGTCCA TGTAGTCGGT CATTCAATGG GCGGGAAAAT TGCGATGGCA ATGGCACTTT TACACCCCGA ACGTATTAAA AGCTTAGTGA TCGCAGATAT CGCACCGGTA GCGTATAGCC CAAGACATCA AACCGTGTTT GCAGGCCTAA CCAGTTTAGT ATTAAACAGC GATACCACTC GAAAGTCTGC CCTAGCACAT TTGATCAACG CCGGTATTGA TGAGCCGACA TCTCAGTTCT TACTAAAGAA TTTGCAACGC ACCGACAGCG GCTTTGAGTG GAAAATGAAT TTAACTGGGC TAATCGAATC TTACGACCGT ATTATCGGTT GGGATTTGCC TTTAACCGGT AACGATCATT TTGATAAACC CGCACTATTT ATCCGTGGCG GTGAGTCCAA TTATGTCACT GCTGAGCATC GAGATGAAAT CATGCGCCAA TTTCCACAAG CCAGTGCAAA AACATTGAAC GGTACAGGCC ATTGGTTACA CGCACAAAAA CCTGAGATAT TTAATCGCAT CGTGTCTGAG TTTATTGAAC AAAACCAAGG GTAA
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Protein sequence | MHYVSSGQGE AVLLIHGLFG NLDNLKNLGS VLQQQHQVIR VDVPNHGLSE HWDNMDYPQL ADAMIDVLDD LHIKQVHVVG HSMGGKIAMA MALLHPERIK SLVIADIAPV AYSPRHQTVF AGLTSLVLNS DTTRKSALAH LINAGIDEPT SQFLLKNLQR TDSGFEWKMN LTGLIESYDR IIGWDLPLTG NDHFDKPALF IRGGESNYVT AEHRDEIMRQ FPQASAKTLN GTGHWLHAQK PEIFNRIVSE FIEQNQG
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