| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1904 |
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| Symbol | |
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| ID | 4278816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2255420 |
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| End bp | 2256340 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134688 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_750588 |
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| Protein GI | 114563075 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0842808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGCA TATTAATTAA TCATAAAGCT AAGGCCGACA TTAGCATCAG TTGTTTTGGC
GAAGTATTGT GGGATTGTTT CCCTGATGGT AAGCGTGTTG GCGGGGCACC TTTAAATGTG
TGTGTCAGAC TTAATGCCCT AGGCATTAAA GGTTCAATGA TAAGTGCCGT TGGCGATGAT
CCACTAGGAC ATGAGCTCGT TAGCTTTATA GATGATCGCG GCGTTAATCG CGACTGTATC
GCTATCGATC CCGTTAAAAG CACCAGCACA GTTCAAGTCA CTTTAGACAA AAATGGATCT
GCGTCATATG ACATTGTCGC CGATACTGCC TGGGATAATA TCGCATTAAC AGAAGATATT
ATTGAGCAAG TTAATCGTAC TGATGTGTTG GTCTTTGGTA GCTTGATTGG ACGCAATGAT
GTGTCTCTTA ATACCTTAAC AGCTTTAGTT AAGTTGGCAT CGTTTTCGGT GTTTGACGTT
AACTTACGTG CGCCGCATTA TCAGATTGAT AGTGTGATTA ATTTGATGAA AAAAGCTGAT
TTCATTAAAT TAAATGACGA TGAGTTGTAT GAAATAGCCA AAGCGATGGG GTCGCCATTT
CATTCTTTAG AACAAAATTT GGATTTTGTT GCCATTCAAA CAAATACAGA CTACTTGTGT
GTCACCAAAG GCAGTCATGG TGCATTACTG AGTATTGGTG GACAGAAGTA TTATAATTCA
GGTTATTTAG TCAATGTAGT TGATACCGTC GGCGCCGGAG ATTCGTTTTT AGGCTCGTTA
CTGTATCAAT TATGCAGTGA TAGTAATCCG CAGTATGCGA TTGATTTTGC TTGTGCTGTG
GGTGCTATGG TTGCTGAGTC TCATGGCGCT ACGCCAATGA TCACCTTAAA TGAAATACAA
GCGTTTATGC ATCCGGTATA A
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| Protein sequence | MNSILINHKA KADISISCFG EVLWDCFPDG KRVGGAPLNV CVRLNALGIK GSMISAVGDD
PLGHELVSFI DDRGVNRDCI AIDPVKSTST VQVTLDKNGS ASYDIVADTA WDNIALTEDI
IEQVNRTDVL VFGSLIGRND VSLNTLTALV KLASFSVFDV NLRAPHYQID SVINLMKKAD
FIKLNDDELY EIAKAMGSPF HSLEQNLDFV AIQTNTDYLC VTKGSHGALL SIGGQKYYNS
GYLVNVVDTV GAGDSFLGSL LYQLCSDSNP QYAIDFACAV GAMVAESHGA TPMITLNEIQ
AFMHPV
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