| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1902 |
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| Symbol | |
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| ID | 4278814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2252400 |
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| End bp | 2253593 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134686 |
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| Product | transposase, IS4 family protein |
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| Protein accession | YP_750586 |
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| Protein GI | 114563073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0975496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAA AACAAGTTTT ATCAAAATGC CTCTCACTTG TCACCCCGTT AATGCACAAA
ACTCGCCGAC AAAGTCTGTT CTCTGCAATT GAAAGCTCAA TGAATGGTGG AGCATTATCA
ATCACAGGGC TTGGCCGTGA TATTGAAAGT AAAGCCAAGG AAAAACATAA GATTAAGCGG
GTTGATAGGC TTTGTAGTAA TCCTTATCTT CATCGTGATA TTGAGTTCAT TTATACCCGT
ATGACCTGCT TGCTCGTCGG GAAAATGAAG CAACCCATTA TTCATATCGA TTGGTCAGAT
CTTGATGACC GTAAGCAGCA TTTTCTCATT CGAGCATCTT TGGCGGCTCA AGGGCGCTCA
TTGACACTTT ATGAAGAAAT ACATCCGCTA AACAAAAAAG AGAAGCCTAA AACTCATCTA
TCCTTTTTGA CCAAACTTAA GGCGATGCTA CCTAATGACT GCAAGCCTAT CATCGTGACT
GATGCTGGAT TTCGAATACC ATGGTTTAAA CAAATACTGT CACTTGATTG GGATTATGTG
GGGCGATTCA GAAACAGAAC ACATTGTAGA AAAACGATTG TTCATCATTG GTATCCAGTC
AAAAGGCTAT ACATACAAGC AAGTGCAAGA GCTAAGAATC TTGGGGTATA TTTTTTAGGT
GAGCAGGCGT CTTTCTGTTC ACGCTTAGTG ATCTTCAAAC GTACAGATAA AGGAAGAAAA
GATAGAACTG CAACGGGTGA TAGAACCAGA CGGAGCAAAC AATCTCGGTC AAGTGCAGAG
CGTGAAAAAG AGCCTTGGTT ACTTGCTACA TCACTTTGTC ATTCAAGTGC TACAGCCAAA
CGAGTCGTAA AAATTTATGC GACTAGAATG CAGATAGAAG AAAGCTTTAG AGATGTTAAA
ACGGGTCTAA AAATGAATGA TAGTGGCAGT AGAATTAAGG ATAAATTAAG CGTTCTACTG
CTCATTGCCT GTCTATCTCA ATTTATGTTG AACCTGCTAG GTTTGGCAGT TAAAGCAGCG
GATAAGCATA GACAATACCA AGCGAATTCA ATCAAACATC GTAATGTTTT ATCAAGCCAA
TTTATAGGAT TAAGAGCCTA CAGAGATAAG TATTTGAGGT TGTTGAAGTC TCACTGGCTA
GCAGGAATAA AGACGTTACA AAGTTTAATC AAGGACCCAC AAGCATGCTA TTAA
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| Protein sequence | MNAKQVLSKC LSLVTPLMHK TRRQSLFSAI ESSMNGGALS ITGLGRDIES KAKEKHKIKR
VDRLCSNPYL HRDIEFIYTR MTCLLVGKMK QPIIHIDWSD LDDRKQHFLI RASLAAQGRS
LTLYEEIHPL NKKEKPKTHL SFLTKLKAML PNDCKPIIVT DAGFRIPWFK QILSLDWDYV
GRFRNRTHCR KTIVHHWYPV KRLYIQASAR AKNLGVYFLG EQASFCSRLV IFKRTDKGRK
DRTATGDRTR RSKQSRSSAE REKEPWLLAT SLCHSSATAK RVVKIYATRM QIEESFRDVK
TGLKMNDSGS RIKDKLSVLL LIACLSQFML NLLGLAVKAA DKHRQYQANS IKHRNVLSSQ
FIGLRAYRDK YLRLLKSHWL AGIKTLQSLI KDPQACY
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