| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1900 |
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| Symbol | |
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| ID | 4278812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2249526 |
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| End bp | 2250488 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134684 |
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| Product | transcriptional regulator, DeoR family protein |
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| Protein accession | YP_750584 |
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| Protein GI | 114563071 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.481716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGCA AGTCGAATTC AGAACTCGCG CGATTAGAGC AAGCGGCAAG AGCAGCATGG
TTATATTACG TCGCCAAGAA TACTCAAGAT GAAATTGCCC AAAAATTAGA AGTATCAAGA
CAGTCAGCGC AACGTTTAGT CGCATTAGCG GTTAGTGAAG GGTTAATTAA AGTCCGTTTA
GATCACCCCA TTGTTAAATG TATGGAGTTG GGCCAACAGT TAACGCAAGC TTTCAATTTA
TTGGAATGCG AAATTGTCCC CAGCGATCCT GCTGACGACA GTTCCGTGCA TGGTTTAGCC
CAATGTGGCG CAGGTGTATT AGAGCGGTAC TTAAAATCTG AACAGCCTAA AACTCTAGCC
TTTGGTACCG GACGAGCACT CAAAGCTTGT ATTGATGAGT TACCTTCGAT GCAATGTCCG
CAACATAAAA TAGTGTCGCT ATTAGGCAAT ATGATGTTAG ACGGTTCTGC ATCAGCATTT
GATATCGTGG TCAGTATGGC TAATCGAGTG CAGGCTAAAC ATTACCCTAT GCCGTTACCC
GTTATTGCTA CTTCAGTGGC GGAAAAGCAG TTATTGCATG ACTTAGCGCC GGTAAAAAGT
ATTTTTGAAT TAGTTATACA AGCAGATGCT ACTTTTGTTG GAATAGGGCA CATGGGCGCA
GAGTCACCAT TATTGCTCGA TGGTTTCATT AATCAGTCAC AGTTAACCGA GTTAATTAAT
GACAATGCCA CTGGTGAAAT CATCAGTTGG GTGTACAACC AGCAAGGGCA GTTACTCGAT
CATTCAATAA ATGAATTAGT GATGAGCTCA CCGTTGAGGA TTGATTCAAA TAAGCCTGTT
TACGGTATTG CTGCTGGCCA ACATAAAGTT GATGCTATAT TTTCAGCATT GCAAGGTCGC
TTAATTAATT CATTGATAAC CAATGAATAT ACAGCCGAAA GAATATTAGC AAAACTAAAA
TGA
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| Protein sequence | MDSKSNSELA RLEQAARAAW LYYVAKNTQD EIAQKLEVSR QSAQRLVALA VSEGLIKVRL
DHPIVKCMEL GQQLTQAFNL LECEIVPSDP ADDSSVHGLA QCGAGVLERY LKSEQPKTLA
FGTGRALKAC IDELPSMQCP QHKIVSLLGN MMLDGSASAF DIVVSMANRV QAKHYPMPLP
VIATSVAEKQ LLHDLAPVKS IFELVIQADA TFVGIGHMGA ESPLLLDGFI NQSQLTELIN
DNATGEIISW VYNQQGQLLD HSINELVMSS PLRIDSNKPV YGIAAGQHKV DAIFSALQGR
LINSLITNEY TAERILAKLK
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