Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1896 |
Symbol | |
ID | 4278808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2243860 |
End bp | 2244372 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638134680 |
Product | hypothetical protein |
Protein accession | YP_750580 |
Protein GI | 114563067 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTATG ATTTAACGGT TGTTCAATTT AGTAAAATGC TTAATAACCT AAGTGCAATC CTTGTCAAAG GTGAAGGCTT TGCAGAAGCT AAAAAAATTG AAATGTCGGT GCTACTTAAT TCACGTTTAG CCCCAGATCA ATTTAACTTA ACTCGTCAAG TGCAAATTGC GTGCGATACA GCCAAATTAG CCGTAGCGCG TTTAACTGGC CAAGAAGATA GTGCGCCAAA ACATGAAGAT AATGAGACGA CATTAGCGGA GTTACAAGCT CGTATAGCTT CTGTTGTCGA TTATTTAGCC ACGTTTACAG CCGAAGACTT TACTGGTGCA GAAACTCGCA AAATTACTCA TCGTCGTTGG GAAGATAAAT ATCTTACTGG GCGTGATTTT GCTTTGGAAC ATGCCATTCC TAATATTTAT TTCCATGTGA CAACTGCCTA TGCAATTTTG CGCCATAATG GTGTTGAAGT GGGTAAAAAA GATTACTTAG GCGCAATGCC ATTTAAGTCG TAA
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Protein sequence | MLYDLTVVQF SKMLNNLSAI LVKGEGFAEA KKIEMSVLLN SRLAPDQFNL TRQVQIACDT AKLAVARLTG QEDSAPKHED NETTLAELQA RIASVVDYLA TFTAEDFTGA ETRKITHRRW EDKYLTGRDF ALEHAIPNIY FHVTTAYAIL RHNGVEVGKK DYLGAMPFKS
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