Gene Sfri_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1896 
Symbol 
ID4278808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2243860 
End bp2244372 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content39% 
IMG OID638134680 
Producthypothetical protein 
Protein accessionYP_750580 
Protein GI114563067 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTATG ATTTAACGGT TGTTCAATTT AGTAAAATGC TTAATAACCT AAGTGCAATC 
CTTGTCAAAG GTGAAGGCTT TGCAGAAGCT AAAAAAATTG AAATGTCGGT GCTACTTAAT
TCACGTTTAG CCCCAGATCA ATTTAACTTA ACTCGTCAAG TGCAAATTGC GTGCGATACA
GCCAAATTAG CCGTAGCGCG TTTAACTGGC CAAGAAGATA GTGCGCCAAA ACATGAAGAT
AATGAGACGA CATTAGCGGA GTTACAAGCT CGTATAGCTT CTGTTGTCGA TTATTTAGCC
ACGTTTACAG CCGAAGACTT TACTGGTGCA GAAACTCGCA AAATTACTCA TCGTCGTTGG
GAAGATAAAT ATCTTACTGG GCGTGATTTT GCTTTGGAAC ATGCCATTCC TAATATTTAT
TTCCATGTGA CAACTGCCTA TGCAATTTTG CGCCATAATG GTGTTGAAGT GGGTAAAAAA
GATTACTTAG GCGCAATGCC ATTTAAGTCG TAA
 
Protein sequence
MLYDLTVVQF SKMLNNLSAI LVKGEGFAEA KKIEMSVLLN SRLAPDQFNL TRQVQIACDT 
AKLAVARLTG QEDSAPKHED NETTLAELQA RIASVVDYLA TFTAEDFTGA ETRKITHRRW
EDKYLTGRDF ALEHAIPNIY FHVTTAYAIL RHNGVEVGKK DYLGAMPFKS