Gene Sfri_1885 details

Gene Information

• Locus tag: Sfri_1885
• ID: 4278343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 2229080
• End bp: 2229640
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638134669
• Product: hypothetical protein
• Protein accession: YP_750569
• Protein GI: 114563056

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATGGC TATCTTTATT GTTACTTGCT GTGAGTCTAT GCGTAAGCAC TTTGAATGTT 
TATGGCGCAG AGCCGATCCC CCACCAAACA TTGAATACTA ATTTTACAAA ATTGACTAAC 
GCTTTTGAAC AACTTGATTT ATCCGCTATG GAACAAATAT ACACAGACGA TGCCGTGTAT 
ATTTCTGAAA CACAAGATAG AGGAATTATT AGTGGCAAAG AAAGCATACT CAATCTTTAC 
AGTCGATTTT TTAATAAAAT TAAACATAAA AATGCCAAGC TTGAAGTCGA TTTCCGTGTA 
CTTGTACGTT ATAGCGAGCC AAATAGTGCA ACCGATATAG GTTATTATTT AGTACGTTTT 
CACCCGGGTA AAGAATCAGG CGAACCGGTC AGTGAGTTTG CGGGTAAATT TGTGACTGTG 
TTTACCAAAG ACAGTAAGCA ACAGTGGAAA ATTAGTGTCG ACTCTAATAC TCACGCTGCG 
CCGCATTTTT ACTATGATGC TAAACCAGTA CCAAATCTTT ACTATGGTCG ACAATTTATC 
GCTGCTACAT CACAAGAATG A 

 

Protein sequence

MPWLSLLLLA VSLCVSTLNV YGAEPIPHQT LNTNFTKLTN AFEQLDLSAM EQIYTDDAVY 
ISETQDRGII SGKESILNLY SRFFNKIKHK NAKLEVDFRV LVRYSEPNSA TDIGYYLVRF 
HPGKESGEPV SEFAGKFVTV FTKDSKQQWK ISVDSNTHAA PHFYYDAKPV PNLYYGRQFI 
AATSQE