| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1878 |
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| Symbol | |
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| ID | 4278337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2220763 |
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| End bp | 2221824 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134660 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_750563 |
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| Protein GI | 114563050 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0031] Cysteine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.323374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCTA CTTGGGTCAA TCAGGCCATC GCAAAAATAG AAGCCGATTA TCAACGTTCC
GCAGATACAC ATCTTATAAA ATTAGATCTT CCGCAACTTG ATGGTATAGA CATTTATTTA
AAAGACGAAA GTACTCATCC AACAGGTAGC TTAAAACATC GCTTAGCTCG ATCACTATTT
CTGTATGCGC TATGTAATGG CTGGATAAAA AAAGACACTC CCATTATTGA GTCTTCATCT
GGGAGCACCG CTGTATCTGA AGCCTATTTT GCGCGATTAC TTGGATTGCC CTTTATCGCT
GTAATGCCAC AAACGACTGC TAAAAAGAAG ATTCAACAAA TTGAATTTTA TGGTGCGCGA
TGTCATTTTG TCGATAATGG TAGCCAAATG TATGCTGAAT CAGAAAAATT AGCCGCTGAG
TTGCAAGGCC ATTATATGGA CCAATTTACG TATGCTGAGC GAGCCACCGA TTGGCGAGGT
AATAACAATA TTGCTGATTC TATATTTATC CAAATGGAAA AAGAGCCCCA TCCTATTCCA
AGCTGGATTG TAATGAGTCC TGGTACTGGT GGCACCAGCG CTACCATTGG CCGCTATATT
CGTTATCAGC AGCAACAAAC GCAGTTGTGC GTCGTCGACC CCGAAAATTC TGTATTCTAC
GATTACTTTC ACAATGGTGA CGCGAGCATT ATTAGCGATA AGAGCAGTAA AATAGAGGGA
ATTGGTCGGC CACGTGTTGA ACCGTCATTT ATTGCTGGTG TAGTTGACTC TATGATTAAG
ATCCCTGATG CCGCCTCAAT CGCAACGATT CAGTGGTTAG AGCAACTCAT AGGGCGTAAA
ACAGGCGCAT CTACTGGTAC TAACTTATAT GGGGCGTTGC TGTTAGCAAC ACAAATGCGT
AACGAAGGTC AAACAGGTTC TATTGTGACC TTAATTTGTG ATGCGGGTGA GCGCTATCTT
GATACCTATT ACAACCCGCA ATGGATAGAA GACAATATTG GCTGTTTCGA ACACTACCGA
GAAAAACTCG TCGCGTTTAA TGAATCAGGT TTACTTCGTT AA
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| Protein sequence | MSSTWVNQAI AKIEADYQRS ADTHLIKLDL PQLDGIDIYL KDESTHPTGS LKHRLARSLF
LYALCNGWIK KDTPIIESSS GSTAVSEAYF ARLLGLPFIA VMPQTTAKKK IQQIEFYGAR
CHFVDNGSQM YAESEKLAAE LQGHYMDQFT YAERATDWRG NNNIADSIFI QMEKEPHPIP
SWIVMSPGTG GTSATIGRYI RYQQQQTQLC VVDPENSVFY DYFHNGDASI ISDKSSKIEG
IGRPRVEPSF IAGVVDSMIK IPDAASIATI QWLEQLIGRK TGASTGTNLY GALLLATQMR
NEGQTGSIVT LICDAGERYL DTYYNPQWIE DNIGCFEHYR EKLVAFNESG LLR
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