| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1864 |
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| Symbol | |
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| ID | 4278324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2204215 |
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| End bp | 2205099 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134647 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_750550 |
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| Protein GI | 114563037 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000003415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACACCAATGA ATAGTGATGG CACAGTAGAT
TATGCAAGTC TTGAACGACT TGTTGAGTTC CATATTGAAC AAGGTACTGA TGCCATAGTC
GCGGTCGGTA CTACAGGCGA GTCTGCAACT TTGCCTATGA CAGAACATGC GGCCGTTGTT
TGCCAAACTG TTAAGTTTGC ATCAGGTCGT ATTCCTGTCA TTGGTGGTAA TGGCGCCAAT
GCCACTGCAG AAGCAATCGA ATTAACCAAA TCAATGCAAA AATCAGGTGT TGTCGCCATG
CTTGGCGTAA CCCCTTATTA CAATAAACCA ACGCCTAAGG GATTAATTGC CCATTATACG
GCCGTTGCTG CAAGTACTGA CATTCCTCAA ATTCTTTATA ATGTGCCAGG TCGTACTGCT
GTTGATATGA AACCAGAAAC TGTGGCTGAA TTATCAAGTG TCAGTAATAT TATTGGTGTA
AAAGAAGCCA CGGGTGATTT AAGCCGCGTT GCACGTTTGC GTGAACTGTG TGGTGAAGAT
TTCTTACTTT ACAGCGGTGA CGATGCCACA GCACGTGAGT TTTTATTACT CGGTGGTAAT
GGTGTTATCT CAGTTGCAAA TAATATCGTT CCACATGCGT TTAAAGCCAT GTGTGATGCT
GCGTTAGCCA AAAATGCACA ATTAGCTGAA ACAATCGATC AACCATTAAC GGGTATTTAT
CGCTCGTTAT TTTGTGAAGC CAACCCAATT CCAGTGAAAT GGGCTGTTCA TAGAATGGGT
TTGATAGCTA ATGGTCATAT TCGTTTACCT TTAACTGAAC TTTCTGAGCA GTTTCATGGT
CTGTTAATAG AAACAATGAA ACAAGCTCAT ATTGAGGTAA AATAA
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| Protein sequence | MINGSIVALI TPMNSDGTVD YASLERLVEF HIEQGTDAIV AVGTTGESAT LPMTEHAAVV
CQTVKFASGR IPVIGGNGAN ATAEAIELTK SMQKSGVVAM LGVTPYYNKP TPKGLIAHYT
AVAASTDIPQ ILYNVPGRTA VDMKPETVAE LSSVSNIIGV KEATGDLSRV ARLRELCGED
FLLYSGDDAT AREFLLLGGN GVISVANNIV PHAFKAMCDA ALAKNAQLAE TIDQPLTGIY
RSLFCEANPI PVKWAVHRMG LIANGHIRLP LTELSEQFHG LLIETMKQAH IEVK
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