Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1858 |
Symbol | |
ID | 4278318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2194988 |
End bp | 2196112 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134641 |
Product | 2-methylcitrate synthase/citrate synthase II |
Protein accession | YP_750544 |
Protein GI | 114563031 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGACA AGAAATTATC AGGCGCAGGA TTACGCGGTC AGAGTGCTGG CGAAACAAAA TTATGTACAG TCGGTAAATC AGGTTCAGGC CTAACGTACT GCGGTTACGA TGTCTCTGAT TTAGCTGATA ACGCTACCTT TGAAGAAGTC GCTTATTTAT TATTTAACGG CGAGTTACCA AACCAAGCTC AGCTAACTGC ATATAAAGCA GAATTGAAAG CGCAGCGTGA TTTACCTGAT GCACTAAAAG CGGTATTAAA ATTAATTCCT GCTGATGCTC ATCCAATGGA TGTTATGCGT ACTGGTTGCT CGTTTTTAGG TAACCTTGAG CCAGAAGTCG ATTTTACTCA GCAACACAAA GCGTCGAACC GCTTATTAGC CGCATTTCCG GCCATCATGT GTTTTTGGTA CCGTTACACT CATGACGGTG TAGAAATTGA TTGCACCACC GATGAAGATT CTCTGGGTGG ACATTTTCTT AAACTGCTTC GCGGTGAAAC GCCGTCAGCG CAACATCGCC GTGTAATGGA TGTGTCGTTG ATTTTGTATG CAGAGCATGA GTTCAACGCA TCAACCTTTA CCGCGCGTGT ATGTGCTTCA ACATTATCGG ATATGTATTC TTGTGTTACT GGTGCGATTG GTTCATTACG TGGCCCGCTG CACGGTGGCG CTAACGAAGC GGCGATGGAT ATGATCCAAA AGTTCAGCTC GCCAGCTGAT GCTAAAGTGC AAATGGCATT GATGTTAGAA CGCAAAGAAA AAATCATGGG CTTTGGCCAT GCTATTTATA GCGAGTCTGA TCCACGTAAT GTGATTATTA AGAAGTGGTC TGAAAAGCTG GCTCACGAAA ACGGTGATAC CTCGCTATAT GACATTTCTG TCGCGTGTGA AGAGTTTATG TGGGACACAA AAAAATTATT CTGCAATGCA GATTTCTTCC ATGCCTCTGC TTATCATTTT ATGGGTATTC CAACTAAGTT ATTTACGCCA ATCTTCGTTT GTTCACGTTT AACCGGTTGG GCGGCACATG TAATGGAGCA GCGATCGAAC AACCGCATTA TACGTCCAAG TGCAGATTAT GTGGGCAGTG AGCCTCGTAA AGTGGCGCCT ATCAGCCAAC GTTAA
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Protein sequence | MVDKKLSGAG LRGQSAGETK LCTVGKSGSG LTYCGYDVSD LADNATFEEV AYLLFNGELP NQAQLTAYKA ELKAQRDLPD ALKAVLKLIP ADAHPMDVMR TGCSFLGNLE PEVDFTQQHK ASNRLLAAFP AIMCFWYRYT HDGVEIDCTT DEDSLGGHFL KLLRGETPSA QHRRVMDVSL ILYAEHEFNA STFTARVCAS TLSDMYSCVT GAIGSLRGPL HGGANEAAMD MIQKFSSPAD AKVQMALMLE RKEKIMGFGH AIYSESDPRN VIIKKWSEKL AHENGDTSLY DISVACEEFM WDTKKLFCNA DFFHASAYHF MGIPTKLFTP IFVCSRLTGW AAHVMEQRSN NRIIRPSADY VGSEPRKVAP ISQR
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