Gene Sfri_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1850 
Symbol 
ID4278116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2186928 
End bp2187578 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content45% 
IMG OID638134633 
Producthypothetical protein 
Protein accessionYP_750536 
Protein GI114563023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.771027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCCTA CCAATAAACC TATAGCCGTG ATTGTTGGCG ATGTTGTTGA CTCAACAAAG 
CTAACCTCTG CGCAGTTTGA GCTACTACTT AAACAGATCA AATCTATCCA GTCTTGGATT 
AGCGAGGGGC ATAGCGAAAA TGCGCACAGT ATTGAGCGCG GTGATGAGTT TCAGTCTGTC 
GTGCATGATA TTGAAAATGC GTTGAGATAC ACCGTTATAT ACCGGATTGG TATTAAGGCG 
CTTGGTAAAG CATTTGATAG CCGGATTAGT TTTGCAATTG CGGCAAATGC CGATTTACGT 
GAGTCGGTGT CGGAGTCGAT GGGGCAAGCA TTTGTGCTGT CTGGCCGCGG ACTCAGTGGC 
CTTAAGAATG ACCGATTATT GTTTAGCTCC GATAGCATCG CTCTCACTGA GTATTTTGAC 
TTACTGTTTA AGTATCTTGA TAAGCAACTT AACGACTTAA CTGCGCGCCA ATGTGAAGTG 
ATGTTGCCAA TGCTTCGAAC CAATGAGGAT TTGTCGATTA GTGAGTTAGC TGACATGCTT 
GATGTGGCTA CAGCGACTGT TAGCAAGTCA CTTAAAGCGT CTGGTTGGCC GTTGATCCAT 
GAGTTAAATT GTCGGTTTAT AAAGAAAGTC GCGGGGCTCA AGTATGTTTG A
 
Protein sequence
MEPTNKPIAV IVGDVVDSTK LTSAQFELLL KQIKSIQSWI SEGHSENAHS IERGDEFQSV 
VHDIENALRY TVIYRIGIKA LGKAFDSRIS FAIAANADLR ESVSESMGQA FVLSGRGLSG 
LKNDRLLFSS DSIALTEYFD LLFKYLDKQL NDLTARQCEV MLPMLRTNED LSISELADML 
DVATATVSKS LKASGWPLIH ELNCRFIKKV AGLKYV