| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1842 |
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| Symbol | |
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| ID | 4278109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2174016 |
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| End bp | 2175422 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134626 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_750529 |
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| Protein GI | 114563016 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAACG ACATTATATC GCTCGCCAAC AATGTGCTAT GGGGCGAGTA CCAAGTACTC
ATTTATATAT TGGTATTTGC CGGTATATGG TTTTCATTGA AATTAAGATT TATTCAACTT
CGCCATTTTG GTTACATGTT TAAAGTGATG AAAGGCAGCA CACAAGGTGA CAAATCTGGC
ATTAGCTCGT ATCAAGCATT ATGTACTGGC CTCTCTGCCC GAGTGGGAAC CGGTAATTTA
GCCGGTGTCG CGATGGCGAT TTCGTTGGGT GGCAGCGGCG CAGTATTTTG GATGTGGGTT
ATTGCGCTAC TGGGTATGGC AACTGGATTT GCCGAAAGTA TTTTAGGTCA GTTGTATAAA
GTGCGCGACG ACCATAAAGA ATACCGCGGT GGACCCGCTT ATTATATCCG CGCTGGGCTG
AATAAACCTT GGTTAGCGGT ATTATTCGCG CTGTGTTTAT TCCTGGGTTA CGGCATTAGT
TTCAGTGCCA TGCAAGCCAA CACAATTACT GACGCACTCA ACCACACTTT CGAGTTATCG
CCGGTATATT CCGGTGCGGT TATTACGTTT ATTGCTGGCA TCATCGTTAT GGGAGGTCTT
CGCAGTATTG CGCGTTTTGC TGAGTTCGTG GTGCCGTTTA TGGGATTGGC ATTTATTTTA
TCCGCGGTGG TGGTCACCAT TATTAATATC CAACAAGTAC CCGGAGTATT GATGGATATT
ATTAACTCTG CTTTTGGGTT AAATGAAGCG GCGGCTGGCG CACTGGGTGC TGCGATTAAA
AATGGGATTC AACGCGGGTT ATATTCTAAC GAAGCTGGCG CCGGTAGTGT GCCGCATGCC
GCAGCTGGTG CCACACCGGT TCCTAATCAC CCGGTTGCAC AAGGTTACGT ACAAATGCTT
GGGGTGTTTA TCGACACTAT GGTGTTGTGT AGCTGTACCG CGATTGTGAT TTTATTGGCT
CAAGGCAGTA TTGGCTCTGA AATGGAAGGT ATTCGGATCA CTCAAAACGC CATGACTTAC
CATATGGGAA TAAGCGGCGA TATGTTTGTT GCCATCATTA TTACCCTATT CTCTTTTACT
TCTGTGGTGG CCAACTATGC TTATGCCGAA AGTAACTTAC ATTTATTTAA GCTCGACAAT
ATCTATGGCC GCACCATTTA TACACTTTTG TATTTAAGCA TGGTGTATTG GGGCGCCAAT
GCCTCATTAA AAGAAGTGTG GAACATGGCC GACATGGCAC TAGGTTTAAT GACGGTAGTG
AACATCAGCG CCATAATGCT GTTAACCCCG ACCATCGTAA ATTTAACTCG CGATTATCAA
GTTAAACTTA AAACCACTAA CAAGCCTGAA TTCAAACTGG CCGATGTGAA AATACAAGGT
AAAACAGAAG ACGGTGTGTG GTCTTAG
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| Protein sequence | MINDIISLAN NVLWGEYQVL IYILVFAGIW FSLKLRFIQL RHFGYMFKVM KGSTQGDKSG
ISSYQALCTG LSARVGTGNL AGVAMAISLG GSGAVFWMWV IALLGMATGF AESILGQLYK
VRDDHKEYRG GPAYYIRAGL NKPWLAVLFA LCLFLGYGIS FSAMQANTIT DALNHTFELS
PVYSGAVITF IAGIIVMGGL RSIARFAEFV VPFMGLAFIL SAVVVTIINI QQVPGVLMDI
INSAFGLNEA AAGALGAAIK NGIQRGLYSN EAGAGSVPHA AAGATPVPNH PVAQGYVQML
GVFIDTMVLC SCTAIVILLA QGSIGSEMEG IRITQNAMTY HMGISGDMFV AIIITLFSFT
SVVANYAYAE SNLHLFKLDN IYGRTIYTLL YLSMVYWGAN ASLKEVWNMA DMALGLMTVV
NISAIMLLTP TIVNLTRDYQ VKLKTTNKPE FKLADVKIQG KTEDGVWS
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