Gene Sfri_1840 details

Gene Information

• Locus tag: Sfri_1840
• ID: 4278107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2172379
• End bp: 2172849
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638134624
• Product: Ferritin, Dps family protein
• Protein accession: YP_750527
• Protein GI: 114563014
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant)

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGACA TCGATATTGG TATAAAAAAA GATGACCGAC TAAAAATAGC CGAAGGTTTA 
AAAAGCTTAT TGGCCGACTC TTATACACTT TATTTGCAAA CCCATAATTT CCATTGGAAT 
GTCACAGGGG TACATTTTCG CGAATTACAC TTAATGTTTG AAGAACATTA CACTGAGCTT 
GCGGTTGCGG TTGATGATAT TGCCGAGCGT ATTCGTACCT TGGATGTGGC AGCACCGGGA 
ACGTATAAAG AGTTTGCTCG CCTGAGTTCA ATTAAAGAAG TTGAAGGTGT GCCGAGTTCT 
GCTGATATGG TTGACTTACT GACCCAAGGC CATGAACAAG TGGTTAAAAC ATCGCGACAA 
GTGCTTAAGT TAGCCCAAGC TGCTGACGAT GAGTCAACTG CTGCTTTAGT GTCTGATCGC 
ATGCGAATAC ACGAAAAAAC AGCGTGGATG TTAAGAGCAA CTCGCAAGTA A 

 

Protein sequence

MTDIDIGIKK DDRLKIAEGL KSLLADSYTL YLQTHNFHWN VTGVHFRELH LMFEEHYTEL 
AVAVDDIAER IRTLDVAAPG TYKEFARLSS IKEVEGVPSS ADMVDLLTQG HEQVVKTSRQ 
VLKLAQAADD ESTAALVSDR MRIHEKTAWM LRATRK