| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1838 |
|---|
| Symbol | |
|---|
| ID | 4278105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2170446 |
|---|
| End bp | 2170940 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638134622 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_750525 |
|---|
| Protein GI | 114563012 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0993965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAG TTGCTTTTCA AGACTGTTAC CCAGATGAGC TTAGCCATTG TTATGGCTGT
GGAAAAAATA ATACTAACGG TCATCAACTT AAAAGTTACT GGCAAAGTAA CAATAAAAAC
CCACAGGGCT TAACCATCGC TCATTATACG CCTGAAGCTT GCTATACGGC TATCCCCGGC
TTTGTTTATG GAGGTTTATT AGCATCATTA ATTGACTGCC ATGGCACAGG TAGCGCCGCA
GCGGTGGCTT TTCAGCAGGC AAATCGAGCT ATGGGAACAT TGCCGCCATT ACGTTTTGTT
ACCGCGGCAT TGAATGTGAG CTATCTAGCG CCAACGCCCA TGGGCGTTGA ACTTGAATTA
ATTGGGACTT TTGTCGAAGT AAAAGAAAAG AAAGTCGTAG TAGAAATAAC AGTCTCTGCA
AACAATGTGA TTTGTGCTAA AGGCACTGTC ATAGCAGTAA AAATGCCAGA CTCTATGTTA
AATGTTAAAT GTTAA
|
|---|
| Protein sequence | MSEVAFQDCY PDELSHCYGC GKNNTNGHQL KSYWQSNNKN PQGLTIAHYT PEACYTAIPG
FVYGGLLASL IDCHGTGSAA AVAFQQANRA MGTLPPLRFV TAALNVSYLA PTPMGVELEL
IGTFVEVKEK KVVVEITVSA NNVICAKGTV IAVKMPDSML NVKC
|
|---|
| |