Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1837 |
Symbol | |
ID | 4278104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2168811 |
End bp | 2170088 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638134621 |
Product | putative phenylacetate-coenzyme A ligase |
Protein accession | YP_750524 |
Protein GI | 114563011 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0779546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATC ACAAATATAG GCTAACAATG AACAGCTATT TTAATAAAAA TGCGTGCCAA GATGCAGATG CTCGAGAGCA TTCACTATTC ACTAAACTGC CTGATTTTCT TAACTTTGCT AAACATGAAT GTTTACACTA TCAGCAGACA CTGAACAATA TTGATGTTGA TAAAATTGAT AGTAGAGCGC TATTAGCTAA ATTACCTATT ACGCGAAAAT CAGATTTGAT TAATCTGCAA AAGCTGAATC CTCCGCTGGC AGGATTAAAT GCTGCAAGCG CAAAATTTCA TCGAATTTTT CAATCGCCAG GGCCTATTTA TGATCCTGAA CATTGTACTG ATGACTGGTG GCGACTCGGG CAAGCTTTCC ATGCTGCAGG GTTTAAGCAA GGTGATATTG TTCAAAACTG TCTTTCTTAT CATTTAACAC CTGGCGGGTT TATTTTAGAT TCAGGAGCGC GAGCCTGTGG CTGTGTGGTT ATACCGGCAG GGCCAGGACA AACAGAACAA CAGCTCGATA TAATCGAGGA TTTAAAGCCT AACGGTTATT GTGGTACACC TTCATTTTTG AAAATTTTAT TGGATAAAGC AACTGCTGAC AATCGTGATG TGAGTAGTTT ACAAAAAGCA TTGGTTACAG GTGAGGCATT ACCTACAGCA CTTAGACGCG AGTTTGACGC TGCAGGAATT AGTACCTTAC AAGCTTATGC TTCTGCAGAT GTTGGCTTAA TTGGTTATGA AACTATAGCC GACGATGGCT TTATTATTAG CGAGGATGTC ATTGTTGAGA TTGTGCGTCC AGGTAGCCTA TTACCGGTTG CTGATGGCGC AATAGGCGAG GTTGTGATCA CAAGTTTTAA TCGAGATTAT CCCTTAATTC GTTTTGCGAC AGGAGACTTA TCTGCAATCA AGGCAGGTGA AAGCGCTTGT GGTAGAACCA ATATGCGAAT AAAGGGATGG TTGGGACGTG CAGACCAAAC CACTAAAGTT AAAGGTATGT TTGTTCATCC TGAACAAGTT GACAAAGTCT GTCAAAGTGA TGCCTGTATT ATAAAAGCGC GTTTAGTCGT GAGTCAGGTT AATCATCAAG ATAAGATGCA CCTAGTTTGT GAAGTCATTG AATCAGCCCT TCGTGATGGT AATGAACAGG TACTGAAAGA TAAAATTGCC CAAACATTAA AGACAGTAAC CAAATTAACA GGCTCAGTAG AATTAGTACC CCTTAATAGC TTACCTGATG ATGGTAAGGT GATTGATGAA CAAAGGGATT TTGATTAA
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Protein sequence | MKNHKYRLTM NSYFNKNACQ DADAREHSLF TKLPDFLNFA KHECLHYQQT LNNIDVDKID SRALLAKLPI TRKSDLINLQ KLNPPLAGLN AASAKFHRIF QSPGPIYDPE HCTDDWWRLG QAFHAAGFKQ GDIVQNCLSY HLTPGGFILD SGARACGCVV IPAGPGQTEQ QLDIIEDLKP NGYCGTPSFL KILLDKATAD NRDVSSLQKA LVTGEALPTA LRREFDAAGI STLQAYASAD VGLIGYETIA DDGFIISEDV IVEIVRPGSL LPVADGAIGE VVITSFNRDY PLIRFATGDL SAIKAGESAC GRTNMRIKGW LGRADQTTKV KGMFVHPEQV DKVCQSDACI IKARLVVSQV NHQDKMHLVC EVIESALRDG NEQVLKDKIA QTLKTVTKLT GSVELVPLNS LPDDGKVIDE QRDFD
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