| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1836 |
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| Symbol | |
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| ID | 4278103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2167927 |
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| End bp | 2168748 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638134620 |
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| Product | ABC transporter related |
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| Protein accession | YP_750523 |
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| Protein GI | 114563010 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0163403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACAAA TTGCAACAAA AATACAACCC ACATCATCTA TATTAACGGT GAATAATATT
GAAGTGGTTT ACGATGACGT TATTCAGGTA TTACGCGGTG TAAGCTTAGA TGTGCCAGAT
GGCGAAGTTG TTACCTTACT AGGCCCTAAT GGTGCTGGGA AATCAACGAC GCTTAAAGCT
ATTTCAGGTT TGTTAAAAAC CGAAAATGGT GAGGTAACGA AAGGTGATAT TACTTTTATG
GGCGAGCGTA TTGACAGTAA AAATGCTGAA GATGTTGTTG CTAGTGGCTT ATTTCAGGTG
ATGGAAGGGC GCCGCATTAT TGAGGATATG TCATCAATAG AGAATTTAAA GCTGGGTGCT
TTTACCCGTA AAGATTCTCG AATAAATCAA GATATTGAAA TGGTATTCCA CTATTTCCCT
CGCTTGAAAG AACGAACTGG ATTAGCGGGT TATTTATCCG GTGGTGAGCA GCAAATGCTT
GCAATAGGTC GTGCATTAAT GGCGCGTCCA AAGATGATTT GTTTAGATGA ACCATCAATG
GGTCTATCCC CACTATTAGT CAAAGAAGTT TTCGGTATTA TTAAAAAAAT TAACCAAGAC
CAAGGGATCA CCATGTTGTT GGTCGAGCAA AATGCCAATT ACGCTCTACG TGCAGCAAAT
TATGGTTATA TCATGGAATC AGGAAAAATT GTGCTTGATG GTACGCAAGA ACAACTCATG
AGTAATGAAG ATGTTAAAGA GTTTTATCTC GGCGGCGGTA ATGAAGAACG CAAGAGTTTT
AAAGGCTTGA AATCTTATAA ACGCCGCAAG CGTTGGTTAT AA
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| Protein sequence | MPQIATKIQP TSSILTVNNI EVVYDDVIQV LRGVSLDVPD GEVVTLLGPN GAGKSTTLKA
ISGLLKTENG EVTKGDITFM GERIDSKNAE DVVASGLFQV MEGRRIIEDM SSIENLKLGA
FTRKDSRINQ DIEMVFHYFP RLKERTGLAG YLSGGEQQML AIGRALMARP KMICLDEPSM
GLSPLLVKEV FGIIKKINQD QGITMLLVEQ NANYALRAAN YGYIMESGKI VLDGTQEQLM
SNEDVKEFYL GGGNEERKSF KGLKSYKRRK RWL
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