| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1834 |
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| Symbol | |
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| ID | 4278101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2165417 |
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| End bp | 2166490 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134618 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_750521 |
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| Protein GI | 114563008 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.519151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGTT TAACAATGCG ACCGTGCGGA GATTTTCGTA CTAGCTATAA ACAAGATAAT
ACTATTTTTG AAACTAAAAC CATCAAAAGT ATCGCAGTAA TTACTATTGC ACTGCTATGT
CTTGCGCCTT TTGTTGTTGA CGCTTACTAC TTGACGCTAT TTATTCAAAT ATCGTATTTG
GGCATAGCTG CTTTAGGGTT AAACATTCTC GTTGGTTACA CCGGACAAAT ATCCTTAGGT
CATGGTGCTT TTTTTGGCTT TGGTGCGTTT GCATCCGCTT GGCTGAATAC TTCATTTGGT
ATACCGGTAT TGCTTTGTAT TCCACTGGCC GGGTTTTTAA CTATGGGGGT GGGCATGATA
TTTGGTTTAC CTGCTTCTCG TATTAAAGGT TTGTATTTAG CAATAGCAAC ACTCGCAGCA
CAATTTATTT TGGAAGACTT TTTTGCACGT GCCGACTGGT TCTCAGGTGG TTCATCGGGT
TCTTCTGCAG ACCCTATTAG TTTGTTCGGC TTTGTCTTTG ATACCGATGA AAGCTTTTTT
TATGTGGCAT TATTTGCTTT AGTTTTCATG TATATCTGGG GTTGTAATTT AATGCGTAGC
CGAGAAGGGC GCGCGTTTAT TGCCGTAAGA GATCATTACC TTTCTGCAGA AATTATGGGT
ATTAAACTCA ATAAATATCG CTTGTTATCG TTTGGTGTTT CTTCATTTTA TGCCGGTATT
GGTGGTGCGT TATATGCACA TTACTTGGGC TATGTGTCTG CTGAAGGTTT TACCTTATTT
ATGTCAATTC AATTTCTAGC GATGATCATT ATTGGTGGCT TGGGTTCTAT TAAAGGCACG
TTAATGGGCG TTGTGTTTAT GGTGTTTTTG CCAGAAGTGC TAGAAAGCGG TGTTGGCCTA
ATGAAAATGA CTGACTGGGG CAATATTCCT GCCGTGGTTG ATGGTTTGGC TTACATCAAA
GAAATGGCAA TAGGTTTGGT CATCATCTTA TTCCTCATTT TTGAGCCCGA AGGTATGGCA
CATCGTTGGG CACAAATTAA AAACTATTGG AAATTCTACC CTTTTTCTTA CTAA
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| Protein sequence | MSSLTMRPCG DFRTSYKQDN TIFETKTIKS IAVITIALLC LAPFVVDAYY LTLFIQISYL
GIAALGLNIL VGYTGQISLG HGAFFGFGAF ASAWLNTSFG IPVLLCIPLA GFLTMGVGMI
FGLPASRIKG LYLAIATLAA QFILEDFFAR ADWFSGGSSG SSADPISLFG FVFDTDESFF
YVALFALVFM YIWGCNLMRS REGRAFIAVR DHYLSAEIMG IKLNKYRLLS FGVSSFYAGI
GGALYAHYLG YVSAEGFTLF MSIQFLAMII IGGLGSIKGT LMGVVFMVFL PEVLESGVGL
MKMTDWGNIP AVVDGLAYIK EMAIGLVIIL FLIFEPEGMA HRWAQIKNYW KFYPFSY
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