| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1833 |
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| Symbol | |
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| ID | 4278100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2164427 |
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| End bp | 2165320 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638134617 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_750520 |
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| Protein GI | 114563007 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.576158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATG AATTATTAAT CCAACTGGTT ATCAATGGTT TAATTGTTGG CTTGCTGTAT
GGCGTAGTCG GTATGTGTTT TGTACTGGTT TATAAATCCA CTCAAGTGGT TAACTTTGCC
CAAGGTGAGT TTCTATTGGT TGGTGCATGG GTTTGTTGGG CAATGCTGAT TTACTTGGAA
TTACCATTTA TCGTCGGCTT TTTAGCAACA ATGGTATTTA TGGCAATATT TGGTATTTTA
ATCCAAATGA TTGTACTAAG GCCGATGATT GGCGAACCCA TTATTTCAGT GATTATGGTC
ACCATTGGGT TATCAATATT TTTCCAAGCG TTAATGAAGT GGATATTCGG TGTGTCTGCA
CAGAGTTTTC CAAAAGTATT TGAAACTGAA AATATCCAAA TTTTTGGTTT GAATATCGAA
TCAGCTTACT TAATGAGCAC AGTGATAGCG TTAATTATCA TGGTCGCGTT CTTCTTATTC
TTTAAATATT CCAAATATGG TTTAGCGATG CGAGCAACCG CTTTCGATCA ACAAATCGCT
CAGAGTTTAG GGATATCTGT TAAGCAAGTG TTTGCTATGA GCTGGGGAAT TGCTGCAACA
GTATCGGCAA CCGCAGGTAT TGTTATTGGC ATGGTAAACG GTGTTTCAAA TTCGCTAGCC
GTGATGGGGG TTAAAGTGTT TCCAGCCGTG ATCCTTGGCG GACTAGATTC CATTATTGGC
GCTATTGTTG GAGGTTTAAT TATTGGCGTG CTAGAGAATG TGGCAGAGTT TTTTGATAGT
CAATATCTTC ATATCGGCAA CATGTATGAC ATCGCACCAT TCTATGTATT GTTAATTATT
CTTTGGTTTA AACCGTACGG TTTATTCGGA ACCAAAGATA TTGAACGAAT TTAA
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| Protein sequence | MNYELLIQLV INGLIVGLLY GVVGMCFVLV YKSTQVVNFA QGEFLLVGAW VCWAMLIYLE
LPFIVGFLAT MVFMAIFGIL IQMIVLRPMI GEPIISVIMV TIGLSIFFQA LMKWIFGVSA
QSFPKVFETE NIQIFGLNIE SAYLMSTVIA LIIMVAFFLF FKYSKYGLAM RATAFDQQIA
QSLGISVKQV FAMSWGIAAT VSATAGIVIG MVNGVSNSLA VMGVKVFPAV ILGGLDSIIG
AIVGGLIIGV LENVAEFFDS QYLHIGNMYD IAPFYVLLII LWFKPYGLFG TKDIERI
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