Gene Sfri_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1827 
Symbol 
ID4278095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2154866 
End bp2155297 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content45% 
IMG OID638134612 
Producthypothetical protein 
Protein accessionYP_750515 
Protein GI114563002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.388117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATAG TGAACAAATA TTGCCTAAAT TGCACTGCTC TGGTTTTCGC CAGTGTGTCG 
ATGCTAGTCA ACCCTGCACA GGCTGACGCG CTAACACCTT TCACCAGTGA TGGTTGCAGT
GCGTTTCCTA ATGGGACTTT CGAGCAAAGT GAATTATGGT TGGCATGCTG TCAAAAACAT
GATTACGACT ATTGGAAAGG CGGCACATTT GATGAACGCC TCGCATCAGA TAAAGCGTTA
CGTGCTTGTG TCACAAACGT GGGTCAGCCA CAAATTGCTT TATTGATGTT AGCCGGAGTA
AGAGTGGGTG GCACGCCTTA TTTACCTACT CAATTTCGCT GGGGTTATGG TTGGTCATAC
CCAAGAGATT ATGGTGCACT AACTGACGAT GAGCATCAAC AAGTCGAGCT GTTATCTGGC
CTAGTTATGT AA
 
Protein sequence
MLIVNKYCLN CTALVFASVS MLVNPAQADA LTPFTSDGCS AFPNGTFEQS ELWLACCQKH 
DYDYWKGGTF DERLASDKAL RACVTNVGQP QIALLMLAGV RVGGTPYLPT QFRWGYGWSY
PRDYGALTDD EHQQVELLSG LVM