| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1821 |
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| Symbol | |
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| ID | 4278089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2148238 |
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| End bp | 2149419 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134606 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_750509 |
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| Protein GI | 114562996 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.302452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGT TAACCCTTGA ATATATCAAA AGCATATTAC CGCCACGGCC GGATAACAGT
CATAAAATGA CGTTTGGCCA TGTATTGAAT ATTGCCGGTT CGCTGCATTA CCGCGGGGCA
GCTTATTTGT CGAGTCTATC CGCATTACGA GTGGGCGCGG GTTACGTCAC CTTAGCCAGT
AGCCCATCGG TATGTGACAG TGTGAGTGCA TTAACACCCA ACATCGTTAC TTTTGCGTTA
CGAACGTTGT CGCCATTATC GGTTCACTCA CTACAACGCA CAGCAAATCT ACATCTAAAA
GATGCGCAAA TCGTCGATGT ACAAACTCTT TCACCACAAG CTGTTTTACA GCTCAGAGAT
AAATTGACTC AAGCCAGCGC CATTTCAATT GGCAGTGGTT TAAGCATTGG CCAAAGTACC
GATCAATGCA TCGATATCAC AGCTATTAAC ACTGAGTTAA CTGTAGATGT TGACGTGACT
CTTTGCACTG AGATGAGCGC AGAGATAAGC ACAGACTTGA ACTCAGATTT GAACTCAGAT
TTGAATTCAG ATTTACGTTC AGAGTTGCCT ATTTGTAATG TCATCAAAGA TAATCAACCA
CACTCAAACG AGTTAATCCC CCCACAAGGG AATCATGGTT TTTTTTACGC CCTACTCAAC
GAAATACAAA CCTGCACAAA GCCAGTAATA TTCGATGCTG ACGCGCTAAA CTTTATTAGC
CACTTACTTA ACCCACCAGT ACCATTCGGA ACAACTACGG TGACTTTGCC TAACAAGAGT
ATTATCACAC CCCACCCAAA AGAGCTGGCA AGATTACTCA ATATGGATGT CGCAACACTA
CAAACACAGC GGATGCATTT TGCTCGCTTA GCGGCAAAAC AGTTAAATAC GATTGTGGTG
CTGAAAGGTA AAAACACCGT GATAACTGAC GGTAATGATG TTTTCATTAA CCCAACAGGT
AACAGCGCGC TAGCAAAAGC CGGAACCGGA GATGTGTTAA CAGGTATGAT TTCAGGGTTT
TGCGCTCAAG GCGTTAGCCC AATAAATGCA GCGTGTTTGG GTGTGTATCT GCATGGTTTG
GCAGGCAACA TTGCTGCAGA GGACTTAAGC CAATATGGCA TGTTAGCCAG TGACCTACTT
AGCTATATTC CTAAAGCTAT TTTAAAAGTA TTAGCCATTT AG
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| Protein sequence | MNTLTLEYIK SILPPRPDNS HKMTFGHVLN IAGSLHYRGA AYLSSLSALR VGAGYVTLAS
SPSVCDSVSA LTPNIVTFAL RTLSPLSVHS LQRTANLHLK DAQIVDVQTL SPQAVLQLRD
KLTQASAISI GSGLSIGQST DQCIDITAIN TELTVDVDVT LCTEMSAEIS TDLNSDLNSD
LNSDLRSELP ICNVIKDNQP HSNELIPPQG NHGFFYALLN EIQTCTKPVI FDADALNFIS
HLLNPPVPFG TTTVTLPNKS IITPHPKELA RLLNMDVATL QTQRMHFARL AAKQLNTIVV
LKGKNTVITD GNDVFINPTG NSALAKAGTG DVLTGMISGF CAQGVSPINA ACLGVYLHGL
AGNIAAEDLS QYGMLASDLL SYIPKAILKV LAI
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