| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1820 |
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| Symbol | proX |
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| ID | 4278088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2146961 |
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| End bp | 2147995 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134605 |
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| Product | glycine betaine transporter periplasmic subunit |
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| Protein accession | YP_750508 |
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| Protein GI | 114562995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.117351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATTA AGAAAGTAAT AATGGGTGTC GCTTTAGCTG CAATGACCAT GACAGGGTCT
GCAGCTCTTG CCGATAATCA CCAGCCAGGT GAAGGCGTAA CTGTCAAACC TGCGCGAGCC
ACGTGGGACA CGGGATTTTT TCAGGAAGCG CTTGTACGAC GAGGCCTTGA AACACTTGGG
TATGATGTAG AAAAACCTAA AGATCTGTCG AATCCGATCT TTTACAAAAC AGTGACTCTC
GGTGATGTTG ATTACTGGAC CAATGGCTGG TTTCCAAATC ATGATGACCA GATGCCGAAA
GGATTTTATG ACAAAGGCGA AAAAGTAGGT TTTGTGGTTA AGGCCGGTGG TCTACAGGGC
TATTTGGTGT CTAAGAAAGA GGCAGATAAA TACAACATTA CTTCCCTTGA AGATTTTAAA
CGCCCTGAGG TGAAGAAAGC ATTTGATACC AATGGTGATG GCAAGGCCGA TCTTACCGCC
TGCCCACCAG GCTGGGGATG TGAAAAAATA ATCAGCCACC ATATGGATGT ATACGATCTC
AAAGATGCTA TAAATCCGGT GACCGCTTCA TATGCAGCAG GAATGGCATC GGCGATGGCG
GGTTATAAAA ATGGTGGACC AATATTCTTC TATACTTGGG CACCAAATTG GACCATTTTT
AAACTGAAGC CAGGCAAGGA TGTTGTGTGG ATCAACGTGC CTGAAATAAA GCCGACAAAG
GCGCAAAGTT CTGCAGTTGA ACGGATGACA GTGAATGGAA TTGAAGGCGC GGTTTCTGAC
CCGGTAAAAC TGGGTTTTGT CGTGTCTGAC ATCCAGATAG TCGCCAACAA AAAATTCACC
AAGCATAATC CGGCTGCAAG GAAGTTTTTT GAGGTATTTA CAGTGCCACT TAGTGATATC
AATGAACAAA ATACTCGGAT GAACGAAGGT GAAAAGAGTA CCCAGGATAT TCAAGGCCAC
GTAGATGAGT GGATTACCAA AAATCAGGAT AAATGGAACG GTTGGCTGAC TGAAGCACGT
AATGCTGCTA AATAG
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| Protein sequence | MIIKKVIMGV ALAAMTMTGS AALADNHQPG EGVTVKPARA TWDTGFFQEA LVRRGLETLG
YDVEKPKDLS NPIFYKTVTL GDVDYWTNGW FPNHDDQMPK GFYDKGEKVG FVVKAGGLQG
YLVSKKEADK YNITSLEDFK RPEVKKAFDT NGDGKADLTA CPPGWGCEKI ISHHMDVYDL
KDAINPVTAS YAAGMASAMA GYKNGGPIFF YTWAPNWTIF KLKPGKDVVW INVPEIKPTK
AQSSAVERMT VNGIEGAVSD PVKLGFVVSD IQIVANKKFT KHNPAARKFF EVFTVPLSDI
NEQNTRMNEG EKSTQDIQGH VDEWITKNQD KWNGWLTEAR NAAK
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