| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1819 |
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| Symbol | proX |
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| ID | 4278087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2145579 |
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| End bp | 2146613 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134604 |
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| Product | glycine betaine transporter periplasmic subunit |
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| Protein accession | YP_750507 |
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| Protein GI | 114562994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.350486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACTTA AAAAAGTAAT ACTGGGCGCA GCTTTAGCTG CAATCACAAT GACGGGGTCA
GTAGCTCTTG CTGATACTCT CAAGCCAGGA GAAGGCATAA CCGTTAAACC AGCTCGAGCG
ACATGGGACA CCGGTTTTTT TCAGGAAGCG CTTGTACGAC GAGGTCTTGA GACTTTGGGG
TATGATGTGG AAAAGCCCAA AACGCTGGTC AATCCAATCT TTTACAAAAC GGTCACTCTC
GGTGACATTG ATTATTGGAC CAATGGTTGG TTTCCAATGC ATAACGATCA ACTACCGAAA
AATTTTGATA AAAAAGCTGA AAAGATTGGT TATGTCATGA AAGCCGGTGG ACTAGGTGGC
TATTTAGTGT CTAAAAAAGA GGCAGATAAA TATAATATTA CCTCCCTTGA AGATTTTAAA
CGCCCTGAGG TGAAGAAAGC CTTTGATACC AATGGTGATG GCAAGGCCGA TCTGACTGCC
TGCCCTCCAG GCTGGGGATG TGAAAAAATA ATCACCCATC ATATGGACGT GTATGGTCTC
AAAGATGCTA TCAATCCAGT GAAAGCGGCA TATGCAGCAG GAATGGCATC GGCGATGGCG
GGTTATAAAA ATGGTGGACC AATCTTCTTC TATACTTGGG CACCAAATTG GACCATTTTT
AAACTAAAGC CAGGCAAGGA CGTTGTGTGG ATCAACGTGC CTGAAATCAA TCCGACCAAA
GCACAAAGTT CTGCTGTTGA ACGAATGACG ATAAAGGGAC TTGAAGGCGC AGTTTCTGAC
CCGGTAAAAC TTGGTTTTGT TGCTTCTGAC ATCCAGGTCG TCGCCAACAA AAAATTCACC
AAGCAAAATC CAGCAGCTAG GAAATTTTTT GAAGTATTTA CCCTGCAGCT TGCCGACGTC
AACGAACAGA ATACTCGGAT GAACGATGGC GAAAAGAGTG AACAGGACAT TCAACGCCAC
GTTGATGCGT GGATTGCCAA AAACCAAGAT CAATGGAACG GTTGGCTGAC TGAAGCACGT
AATGCTGCTA AATAG
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| Protein sequence | MILKKVILGA ALAAITMTGS VALADTLKPG EGITVKPARA TWDTGFFQEA LVRRGLETLG
YDVEKPKTLV NPIFYKTVTL GDIDYWTNGW FPMHNDQLPK NFDKKAEKIG YVMKAGGLGG
YLVSKKEADK YNITSLEDFK RPEVKKAFDT NGDGKADLTA CPPGWGCEKI ITHHMDVYGL
KDAINPVKAA YAAGMASAMA GYKNGGPIFF YTWAPNWTIF KLKPGKDVVW INVPEINPTK
AQSSAVERMT IKGLEGAVSD PVKLGFVASD IQVVANKKFT KQNPAARKFF EVFTLQLADV
NEQNTRMNDG EKSEQDIQRH VDAWIAKNQD QWNGWLTEAR NAAK
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