| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1814 |
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| Symbol | |
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| ID | 4277453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2139852 |
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| End bp | 2141150 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134599 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_750502 |
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| Protein GI | 114562989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAG ATAAACAACA ACCGACAACA TCACACGATA CTGATATTCG TCAAACGTTA
GGACTCGATA AGTCTAGTGC AAAGCACAAG TTTGCGGGTA AATGGTTTTG GATTGTTGGG
GGAATTGTTA TTGTTATCAT TGTAGTATGG CAAATATTCA CTAACGGCCA ATCGCAAACT
ATTCACTATA AAACGGCCAA TGCCAACCGT GGATTATTGA GTATAACGGT TACCGCTACT
GGCACGCTCG AACCCGTCAA TCAGGTTGAA GTGGGCTCAG AAATTTCTGG CACAATTAAA
ACGGTACTGG TCGATTTTAA TGATTACGTT AAAAAGGACC AAGTACTTGC GCGCATGGAT
ACAGATCAAT TGCAGGCCAA GGTAAACCAA GCTAAAGCAT CTCTTGACTG GGCAAAAGCG
CAGGTTAAAC AAGTTGAAGC GACCATTATC GAAACCAAAA ACAGCTTAAG TCGTTCCCGA
GAACTCGCTA AAACGGGCAT GTGTTCAGTA CAAGAATGTG AAGCATCACA AGCGACATAT
GATCGCACTG TAGCCAATCT TGCAAGTGCT AAAGCCCAAG TCGTACAGTC GCAAGCAGCG
CTTGATTCAG AGTTAACCAC ACTAGCAAAA GCCACCATAC ATTCACCGAT TGATGGTATT
GTGTTAATTC GTGATGTTGA ACCAGGGCAG ACCATGGCTG CCTCATTTCA AACACCGGTG
ATGTTTACCT TGGCAGAAAA CCTCACTCAA ATGGAATTAC ACGTAGACGT AGATGAAGCC
GATGTTGGCC AGATTAGCGT GGGACAAGAG GCATTGTTTA CTGTGGATGC TTATGCCAAT
CGAAATTTTC CAGCCAAAAT TTCTGAGGTT CATTTTGCTT CTCAAACCGT TGATGGTGTG
GTGACCTATG AAACCGTACT AATTGTCGAT AATTCAGCCT TATTACTGCG TCCTGGGATG
ACGGCCACCG CGGATATTTT AGTTAAACAA GTATCCGATG CATTGCTGGT TCCCAATGCA
GCCTTGCGTT TCAGTCCTCC AGAACAGGAG CAACAAGCCG CTAGCAGTGG CGGCTTAATG
AGTAATTTAC TTCCACGACC TCCAAGCAGC TCACAACCTC AAGAACACGC AGTAAACAGC
AACAAAAATC AACAACACAT ATGGACACTA CGCGACGGCC AACCCATTTC CATAGAAGTC
ACCACCGGAT CGAGTGATGG AATTAACACT GAAATCACTG CTGGCGACAT TGAAACGGGC
ATGGCATTAA TTATCGATAC CATCAGTAAC AAACAGTGA
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| Protein sequence | MTSDKQQPTT SHDTDIRQTL GLDKSSAKHK FAGKWFWIVG GIVIVIIVVW QIFTNGQSQT
IHYKTANANR GLLSITVTAT GTLEPVNQVE VGSEISGTIK TVLVDFNDYV KKDQVLARMD
TDQLQAKVNQ AKASLDWAKA QVKQVEATII ETKNSLSRSR ELAKTGMCSV QECEASQATY
DRTVANLASA KAQVVQSQAA LDSELTTLAK ATIHSPIDGI VLIRDVEPGQ TMAASFQTPV
MFTLAENLTQ MELHVDVDEA DVGQISVGQE ALFTVDAYAN RNFPAKISEV HFASQTVDGV
VTYETVLIVD NSALLLRPGM TATADILVKQ VSDALLVPNA ALRFSPPEQE QQAASSGGLM
SNLLPRPPSS SQPQEHAVNS NKNQQHIWTL RDGQPISIEV TTGSSDGINT EITAGDIETG
MALIIDTISN KQ
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