| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1813 |
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| Symbol | |
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| ID | 4277452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2139133 |
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| End bp | 2139843 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638134598 |
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| Product | ABC transporter related |
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| Protein accession | YP_750501 |
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| Protein GI | 114562988 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCC AGCAACCCTC CCTGATTGAG CTCAGGGACG TCACCAAAGT TTATGGCTCA
GGACAAGCAG AGATGCAGGC CTTGGGCGGA ATAGATTTAA CCATCGAGCG CGGCGAGTTT
GTGGCGGTGA TGGGGCCTAG TGGATCAGGA AAATCAACCT GCATGAATGT GCTAGGTTGC
TTAGATACAC CAACTGCAGG CAGTTATAGG TTTGATGGTA TTGATGTTGG TTCGTTAACT
CGCGATCAAT TAGCATTACT AAGACGTAAC TATCTCGGTT TTGTGTTTCA GGGATTCAAT
TTACTTAACA GAACATCTGC ACTGGAAAAT GTTGAATTAC CACTCATCTA TCGAGGCATG
CCAGCTGCTG AGCGTCGTGA GCATGCATTG AATGCACTCA AAGTAGTAGG CCTTAACGGC
TGGGAAGATC ACACCCCGGG AGAATTATCT GGTGGCCAAC AACAACGAGT AGCGATTGCC
CGCGCGATTG TGACTCAGCC CTCGGTGTTA TTAGCCGATG AACCCACGGG TAATTTAGAT
TCATCGCGCA GTCGAGAAAT AATGGAACTG TTAAGCTCAT TTAATCGCGA CCAAGGCATC
ACCATCGTAA TGGTGACTCA TGAGCCAGAC ATGGCAGCAT TTGCCAAACG CCAAATACAC
TTCCTCGATG GCTTAGTCGC TCATGATGCC AACAACCAAG GACACAGCTG A
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| Protein sequence | MQSQQPSLIE LRDVTKVYGS GQAEMQALGG IDLTIERGEF VAVMGPSGSG KSTCMNVLGC
LDTPTAGSYR FDGIDVGSLT RDQLALLRRN YLGFVFQGFN LLNRTSALEN VELPLIYRGM
PAAERREHAL NALKVVGLNG WEDHTPGELS GGQQQRVAIA RAIVTQPSVL LADEPTGNLD
SSRSREIMEL LSSFNRDQGI TIVMVTHEPD MAAFAKRQIH FLDGLVAHDA NNQGHS
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