Gene Sfri_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1806 
Symbol 
ID4277445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2127797 
End bp2128474 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content42% 
IMG OID638134591 
Producthypothetical protein 
Protein accessionYP_750494 
Protein GI114562981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAG TTAAAAGTGA TACAAGTCAT CATTGTGACA ATCTCGAAGG ATCCATTAAA 
GAGGCGGTTG AGGCAGATAA GGATATTCGG GAAACCGTTC GTTGCATTAC TCTTAAAGCA 
TTGAGTGAAG GCAAACTGGA TCTCAATGAG ATCACTCAGA TTGCAGGCCG CGTGGTTAAA 
GGCACGGGTT TAGGTGCTCA TGGTCGCAAT AGCCAAGACA AGTTAGTGAA GGCTGTTGCG 
GGTCTTGATG ATGCTTTGTG TTCTGCGGCA GAAGCATCCA AATTAGCCGT TGAAGAAGCA 
AGTTCTCATG CTAACACCTT TAGTAAACAG GATTTACAGC GCACCCTTAA TGACCTTAGT 
GAGCTTGAAG TTATGTTTTT AGATACGTTG AAAGACGTAG CCAAAGAGGC TAATGAGGCT 
GTATCCGGTA CCTTAAATGA TTTGGCTCGT CATGGTCGAG TAAGCGGCAC CGCAGTCGGC 
CAGAAAGTAA CTGAAATTTC AACATTGTTA AACCAACAAT TCAGTGAACG GTTAAGCGAT 
ACTGTGACTG CTGGAGTAGA TTCTGCAGCA AAAATAACAA GTAACCTCGC TTATGCGGCA 
GCAGGTTTTC TTGATGCATT TGTACAAAAA ATGGATGAGA AATCAGCATC TAATTCTTCC 
CAAAATAAAA GTAAATAG
 
Protein sequence
MSTVKSDTSH HCDNLEGSIK EAVEADKDIR ETVRCITLKA LSEGKLDLNE ITQIAGRVVK 
GTGLGAHGRN SQDKLVKAVA GLDDALCSAA EASKLAVEEA SSHANTFSKQ DLQRTLNDLS 
ELEVMFLDTL KDVAKEANEA VSGTLNDLAR HGRVSGTAVG QKVTEISTLL NQQFSERLSD 
TVTAGVDSAA KITSNLAYAA AGFLDAFVQK MDEKSASNSS QNKSK