| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1797 |
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| Symbol | |
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| ID | 4277436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2119987 |
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| End bp | 2121318 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134581 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_750485 |
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| Protein GI | 114562972 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00311557 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATT TAGGTTTTGA TTTTGCCCCA GACTTTCGCC CCTTGGCTGC TCGTATGCGT
CCAAGGGACA TTAGCGAATA CATTGGTCAG GCACATTTAT TAGGTGAAGG TAAACCTCTG
CGTAAGGCAC TAGAGGCAAA CCGAGCACAT TCGATGTTGC TGTGGGGCCC ACCCGGTACG
GGAAAAACCA CATTAGCAGA GTTAATTGCC CATTATGCCA ACGCCCATGT TGAACGTATT
TCTGCGGTAA CATCTGGCGT AAAGGACATT CGTGCCGCTA TAGAACAAGC TAAAGCCATT
GCCCAAAGTC GCGGACAACG TACCTTGTTA TTTGTCGACG AAGTTCATCG TTTTAATAAA
AGCCAGCAAG ATGCCTTTTT ACCTTTTATT GAAGACGGCA CAGTTATTTT TATCGGTGCC
ACCACCGAAA ACCCCTCATT CGAAATCAAT AACGCATTAT TGTCGCGTGC ACGTGTTTAC
CTTATTAATC GCCTGAGCTC TGACGAAATT AACTTAATTG TCACTCAAGC TTTAGTCGAT
GTTGAACGTG GTTTGGGTAA ACGCCAATTA ATATTACCTG CCGATGTAGC CAAGCAATTG
GCCGACATAA GTGATGGTGA CGCACGTAAA GCGCTTAATT TGCTTGAGTT AATGAGCGAT
TTAGTGGCAG ATGCTGGCGC GTTTACCACC GAGATGCTGA CGCAAGTTGC CGGACACCAA
GCTGCGGGTT ACGATAAAAA TGGCGATCAA TTTTACGATT TAATTTCAGC AGTACATAAG
TCTGTACGGG GCTCAGCGCC CGATGCCGCT TTGTATTGGT ATTGCCGTAT TTTAGAAGGT
GGCGGCGATG CCTTATATGT TGCCCGCCGT TTATTAGCAA TTGCCTCAGA AGACATTGGT
AATGCCGACC CAGTAGCGAT GACTGTAGCG CTTAATGCCT GGGATTGTTA TCACCGCATT
GGGCCTGCTG AAGGTGAGCG AGCGATAGCA CAAGCAGTAT TGTATTTAGC CAGTGCTCCT
AAAAGTAATG CCGTTTATAG TGCATTTGGT GCTGCTCGCG AGTTAGCAAA ACAAACGGGA
CACGAGCCTG TGCCCAACCA TCTGCGTAAT GCGCCAACCA AACTGATGAA AGACATTGGC
TTTGGCAAAG AATATCGTTA TGCACATAAT GAACCTGGTG CTTATGCTGC GGGCGAAAAT
TACTTTCCAG AATCACTGCA ACACAGTCAA TTTTATCAAC CCACGAACAG AGGTTTTGAA
AAGCGCATTC AAGATAAATT GGCCCAATTA AACCAACTTG ATCAACAAAG CGAGGACAAA
CGCTATGACT AA
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| Protein sequence | MANLGFDFAP DFRPLAARMR PRDISEYIGQ AHLLGEGKPL RKALEANRAH SMLLWGPPGT
GKTTLAELIA HYANAHVERI SAVTSGVKDI RAAIEQAKAI AQSRGQRTLL FVDEVHRFNK
SQQDAFLPFI EDGTVIFIGA TTENPSFEIN NALLSRARVY LINRLSSDEI NLIVTQALVD
VERGLGKRQL ILPADVAKQL ADISDGDARK ALNLLELMSD LVADAGAFTT EMLTQVAGHQ
AAGYDKNGDQ FYDLISAVHK SVRGSAPDAA LYWYCRILEG GGDALYVARR LLAIASEDIG
NADPVAMTVA LNAWDCYHRI GPAEGERAIA QAVLYLASAP KSNAVYSAFG AARELAKQTG
HEPVPNHLRN APTKLMKDIG FGKEYRYAHN EPGAYAAGEN YFPESLQHSQ FYQPTNRGFE
KRIQDKLAQL NQLDQQSEDK RYD
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