| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1781 |
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| Symbol | |
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| ID | 4277420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2093495 |
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| End bp | 2094352 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638134565 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_750469 |
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| Protein GI | 114562956 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAAT TTATACCTGT ATTCGATGGC AATACCATTG CTGTGCGAGC TTCTGGAAAA
CTAACTCTCG AGGATTTCCA GCAATTCTTT CCCCAACTTG AAACGCAAAT TAAACGATTA
GGTAAAATCT CATTACTTTT TGAGTTTGAT AATTTTTCCG GCTGGGATTT AGATGCCGCA
ATAGATGATA TTAAGTTTGG TATGAAACAC CTTAGTGATT TTGAGCGCAT TGCAATGGTT
GGCGATAAGT CTTGGGAACA TTGGATGGCG TTAATCGCGA AGCCTTTTTT GATCTCTAGT
GAAGTGCGTT ATTTTAACCG AGAAAATCTG CAACAAGCAT GGGACTGGTT ACGTGAAAAG
CAAGAGTTTG AAAAAGCGGT AGAACAATTG CAACCCTATC AAAACATTGT GGTTGCGGTG
GATTTCTCCC TGTATTCAAA GCATGCATGC AAACGCGCAA TAGAATTAGC TAACTACTAT
CAAGCTTCAT TAACATTACT CAATGTTGTT CCAGAAGTAC TCGCTTATAC ACTCTATGGC
GATCCAGTGG GCTACAACGT TGTTGATCTA GACATCATCA AAGATCAAAA CAAAAAAAAT
ATTGATGCAG CTCAGTTTCA GATGAAAGCT TTTGTGAATG ATTTGGATAC AAATTTTCCC
ATTGAGACCA AAGTGATTTG CGGTGAGATA AATTATGGCG TTGTGTCTTT TTTGGAAGCA
CAACATATTG ATTTAGCCAT TTTTGGGGCA AAAAAGAAAA AAGGCATAAA CAAGTTATTG
GGCTCAGTGC CGCATTACGT TCAAAATCAT AGTCGTTGTG AAATATTAAT TGTTCCGGTT
CAAGGTCCTG TGTTCTAA
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| Protein sequence | MLQFIPVFDG NTIAVRASGK LTLEDFQQFF PQLETQIKRL GKISLLFEFD NFSGWDLDAA
IDDIKFGMKH LSDFERIAMV GDKSWEHWMA LIAKPFLISS EVRYFNRENL QQAWDWLREK
QEFEKAVEQL QPYQNIVVAV DFSLYSKHAC KRAIELANYY QASLTLLNVV PEVLAYTLYG
DPVGYNVVDL DIIKDQNKKN IDAAQFQMKA FVNDLDTNFP IETKVICGEI NYGVVSFLEA
QHIDLAIFGA KKKKGINKLL GSVPHYVQNH SRCEILIVPV QGPVF
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