| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1776 |
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| Symbol | |
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| ID | 4277555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2085470 |
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| End bp | 2087029 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134560 |
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| Product | major facilitator transporter |
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| Protein accession | YP_750464 |
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| Protein GI | 114562951 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2270] Permeases of the major facilitator superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0516559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGCA ATAATCATAA AAATATCACC CAACAACCGC AGCTTAATTT TTGGCAAATC
TTCAATATGT GTTTTGGCTT TTTGGGGATC CAATTTGGTT TCGCACTGCA AAATGCCAAT
GTCAGCCGTA TCTTTCAAAC TCTAGGAGCA TCCATTGATG ATATTCCCAT TTTATGGATT
GCCGCACCGC TCACGGGCCT CATCGTACAA CCTATTATTG GTTACTTAAG TGACAATACT
TGGAATAGCC TTGGCCGTCG TCGCCCCTAT TTTTTAATTG GTGCAGTATT AACCACATTG
TCACTCTTTA TCATGCCGCA CTCGCCTACG TTATGGATTG CTGCGGGTAT GTTGTGGATT
ATGGATGCCT CAATCAATAT CGCCATGGAA CCGTTTCGTG CTTTTGTCGG CGATAATCTA
CCCAAAAACC AACGGACCCA AGGCTATGCA ATGCAGAGCT TTTTCATTGG TATTGGCGCG
GTGGTGGCAT CTGCCTTGCC ATATATTTTA ACCAATGTAT TTGATGTGGA AAATACCGCC
CCAGCGGGCG AAATTGCCGA CTCTGTACGC TATGCATTTT ACTTTGGTGG CGCGGTACTA
ATGTTGGCTG TGGGTTGGAC CATTATTTCA ACCAAAGAAT ACTCTCCAGA GCAATTAGCT
GAATTTCATC AACAAGACAC CACTGACGCA CAAGACACTA ACGTCAATAC GCGTACAGCC
AAACAATATC AAAATGGTGC GATTATATGG ATGGCGATTG GCGCCATTTT CACCCTCGCA
ATTGTTAGCC TAGATCTAGA TAAGCAACTT TATATTTTAA GTTTGGGTAT TTTTACCTTC
GGACCGCTGC AACTTTACTG TTCGCGTAAG TTAGCCAAAC TGTCAAACAG CAACACTGAA
TCGTCAGTAA CGCGCGACGG ATTAGGCATG ACGTTTAATG TTGTCGATGA TTTGTTTCAT
ATGCCCAAAG CCATGCGTCA GCTAGCACTG GTGCAGTTTT TTGCTTGGTT TGCCCTATTT
GCAATGTGGA TTTACACCAC AGCGGCCGTT ACTTCGTATC ATTACGGCAC CACTGATGTG
GTATCCCAAG CCTATAATGA CGGTGCAGAT TGGGTCGGTA TGTTGTTCGC GTCGTATAAC
GGCTTTGCTG CAATTGCTGC GATTATTATT CCGTTTCTAG CTAAGGCCGT CGGCATTAAA
CTCACCCATA CCATCAACAT GTTTATTGGC GGTGCGGGTC TCATCAGCTT TATGTTTATT
GAAAACCCTA ACCTGTTGTG GATACCAATG ATTGGCGTCG GTTTTGCCTG GGCATCTATT
CTATCGGTAC CTTACGCCAT GTTGTCTGGT GTATTACCCC CGAAAAAAAT GGGCGTTTAC
ATGGGGATTT TTAACTTCTT CATCGTAATT CCACAGCTGT TAGCGGCCAG TATTCTTGGC
TTATTGCTTA AGGTATTTTT TGATGGACAA CCAATTTACG CTTTAGTGCT AGGCGGGATA
TTTATGATGC TGTCGGGCAT TGCGGTGCTA TTTGTAGATC AAGACAAGCA AACACAATAA
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| Protein sequence | MSGNNHKNIT QQPQLNFWQI FNMCFGFLGI QFGFALQNAN VSRIFQTLGA SIDDIPILWI
AAPLTGLIVQ PIIGYLSDNT WNSLGRRRPY FLIGAVLTTL SLFIMPHSPT LWIAAGMLWI
MDASINIAME PFRAFVGDNL PKNQRTQGYA MQSFFIGIGA VVASALPYIL TNVFDVENTA
PAGEIADSVR YAFYFGGAVL MLAVGWTIIS TKEYSPEQLA EFHQQDTTDA QDTNVNTRTA
KQYQNGAIIW MAIGAIFTLA IVSLDLDKQL YILSLGIFTF GPLQLYCSRK LAKLSNSNTE
SSVTRDGLGM TFNVVDDLFH MPKAMRQLAL VQFFAWFALF AMWIYTTAAV TSYHYGTTDV
VSQAYNDGAD WVGMLFASYN GFAAIAAIII PFLAKAVGIK LTHTINMFIG GAGLISFMFI
ENPNLLWIPM IGVGFAWASI LSVPYAMLSG VLPPKKMGVY MGIFNFFIVI PQLLAASILG
LLLKVFFDGQ PIYALVLGGI FMMLSGIAVL FVDQDKQTQ
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