| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1775 |
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| Symbol | |
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| ID | 4277554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2082950 |
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| End bp | 2085412 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134559 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_750463 |
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| Protein GI | 114562950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.039992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAC CACATTTACT CACGCATCGC AGTATCATAG CGAAAGCTGT TACGACCAGC
ATGATGGCTC TAGCCTTAAG TGCGTGCTCA CCTGCAGATA CTCAAGTAAA CACACAAGCT
CAAGTTGTTA ACGTCGCACC CGGTACGCCA GGCACAGAAC CAACTTGGGC GTTCTCAGGA
AAAACTGGCA TAGGCACATC TTACGAGCCC TATGTTAACG GCAATTATCA AGACACAGCT
GCAAACCCGG TCAGTAAAGT ATGGTTTTCG ATTGCTCAAG GCGTATTAAC CGAAACCATG
TTTGGCCTTA TTCACAATGC CCAGCTTAAA GAACTGCAAT TTATTATCTC TGGCAAAGGC
TTTGTCGATA CTGAAAAAAG CAATACTATC AGCACTATTG AGTATTTAGA TACCGATGAT
ATGGGACGAC CATTATCGCT GGCTTATAAA GTCATTAATA AAGATGTTGA AGGTAAATAC
CAAATAGAAA AACATATTTT TACAGATCCC GATAGAAATA GCTTGATGAT GAAAGTCACC
TTTACTGCTT TTGAGGCTGG CATTACGCCA CACCTTTATG TCAATCCGCA CATTGATAAC
AGTGGTGCCA ATGACATTGC TAGTGTTGAA GGCCAATCGC TAGTGGCTTA CACAAGTGAC
ACTAATTCAA CGGTAATGAC TGTTAAAACA GATGTCGATT TTGTCGCCGC TAGCGCTGGG
TTCGTCGGCA CATCTGATGG TATTGTCGAT TTACAAGATA ACGGTAAACT TGATTATCAT
TACCAAACCA CTAGCGACAC TAATCAAGGC GGTAACGTCG CGCTAACAGC ACAATACCCC
ACCCTTGCCA ATGTTAATGA CAGCCTAAGC TTTAATTTGG TTATTGGTTT TGGTAAAGAC
AAAGCAAGCA GCTTAGCCAC CACTCAAGCG ACATTAGATG CGGGTTATGA CGCCGTTAAA
CAAGCGTATT TAGGCGACGA TAAACATCTT GGCTGGAAAG ATTACTTAGC CTCGCTGAAG
CCATTAAATG ACATGAGCAG CAACACTACA GATAACGGTA AATTACTCTA TGCCAGCGCC
TTAGTGTTAA AAGCTCAAGA AGATAAAACC CATGCTGGTG CGTTAATCGC ATCACTTTCA
AATCCTTGGG GTGACACGGT TTCAGCTAAA GTAGGCAGCA CAGGCTATAA AGCGGTATGG
CCACGTGATT TTTACCAATG TGCAATGGCA TTTTTAGCCA TGGGCGATAC TCAAACACCC
AAAGTGGCTT TTGAATATTT AAAGCAGGTT CAAGTTCAAC AACAAACACC TGGTTTTGCA
GGTACTCCTG GATGGTTTTT ACAAAAAACC CATGTCGATG GTGAAATTGA ATGGGTTGGC
GTGCAGCTCG ATCAAACTGC CATGCCAATC ATGCTCGGCT GGAAACTGTG GCAAGCAGGT
GTACTTAACA ATACAGAAAT AACCCAATGG TACAACGACA TGCTTAAACC AGCCGCTAAC
TTTTTAGTTA AAGGCGGTAA CGTAAAACTG GATTGGAATG ACACTAAAAT TACGCCTCCA
AGTACTCAAC AAGAACGCTG GGAAGAGCAA GCAGGATTCT CTCCATCCAC AACTGCAGCC
GTAATTGCCG GTTTAGTGGC TGCCAGTGAT ATTGGAGCGC TAGCGAAAGA TGAACAAGCA
CCTGAGTATG CTGATTTAGC ACGTAAGCTA CAACGTCAGC TCGAAACAAC GATGGCCACC
ACCACAGGCT TATTAGGTCA AACTGATTCC AAAGGTAAAG TTGCACCTTA TTATGTGCGC
ATTAGCCCAA ATGGTAACCC TAATAACACC GATAAGCTCA TTGATAACAA TGGTAAACCT
GGTTTAGATC AGCGCTTGAT CCTCGACGGT GGATTTTTAG AATTAGTCCG TTATGGTGTG
GTTAACGCTA AAGACCCTGT TATTAAAAAC AGCGTCATGC TAATAGACAA CCAAAATCTT
GAAGATAACT TACGAGTTAA ATACCAATTT ACCGCCAAAG ATGGCAGTAA AGTACCAGGA
TACCGCCGTT ATGGTAATGA TGGATACGGT GAAGACACAG TCACAGGTCT TAGCTACGCT
GAAAAAGGCG ACACCGAAAA TCAACGAGGC CGAGTATGGC CCTTCTTTAC CGGTGAACGC
GGTCATTATG AATTAGCCTT AGCAAAAGCG AACGACACGT TAACCCCAGA CACTAAGAAA
GTTTTAATCA ATACCTATGT TCAAGGCATG GAAACCTTTG CTAACCAAGG GTTAATGTTG
CCAGAGCAAG CTTGGGACGG CGTAGGCAAC GCGACTCGCT ATAATTACAA AATGGGCCAA
GGTACCAATA CAGCAACACC GCTAGCGTGG ACCCATGCTG AATACGTTAA ATTGGTGCGT
TCGATGACCG ATGAAAAAGT ATGGGACTTT TACCCTGTTG TACAACAAAC ACTCGCTAAA
TAG
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| Protein sequence | MLKPHLLTHR SIIAKAVTTS MMALALSACS PADTQVNTQA QVVNVAPGTP GTEPTWAFSG
KTGIGTSYEP YVNGNYQDTA ANPVSKVWFS IAQGVLTETM FGLIHNAQLK ELQFIISGKG
FVDTEKSNTI STIEYLDTDD MGRPLSLAYK VINKDVEGKY QIEKHIFTDP DRNSLMMKVT
FTAFEAGITP HLYVNPHIDN SGANDIASVE GQSLVAYTSD TNSTVMTVKT DVDFVAASAG
FVGTSDGIVD LQDNGKLDYH YQTTSDTNQG GNVALTAQYP TLANVNDSLS FNLVIGFGKD
KASSLATTQA TLDAGYDAVK QAYLGDDKHL GWKDYLASLK PLNDMSSNTT DNGKLLYASA
LVLKAQEDKT HAGALIASLS NPWGDTVSAK VGSTGYKAVW PRDFYQCAMA FLAMGDTQTP
KVAFEYLKQV QVQQQTPGFA GTPGWFLQKT HVDGEIEWVG VQLDQTAMPI MLGWKLWQAG
VLNNTEITQW YNDMLKPAAN FLVKGGNVKL DWNDTKITPP STQQERWEEQ AGFSPSTTAA
VIAGLVAASD IGALAKDEQA PEYADLARKL QRQLETTMAT TTGLLGQTDS KGKVAPYYVR
ISPNGNPNNT DKLIDNNGKP GLDQRLILDG GFLELVRYGV VNAKDPVIKN SVMLIDNQNL
EDNLRVKYQF TAKDGSKVPG YRRYGNDGYG EDTVTGLSYA EKGDTENQRG RVWPFFTGER
GHYELALAKA NDTLTPDTKK VLINTYVQGM ETFANQGLML PEQAWDGVGN ATRYNYKMGQ
GTNTATPLAW THAEYVKLVR SMTDEKVWDF YPVVQQTLAK
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