| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1768 |
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| Symbol | |
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| ID | 4277547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2075030 |
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| End bp | 2076754 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134552 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_750456 |
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| Protein GI | 114562943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATCA ATGGAATCGT TGTATCTGCA GGCATCGCTT TTGGTAAAGC CCTGACTATT
ACCACTCAAC TGCCACCTCT CGATTTTAAA CTGCTTTCTA TTGAGCAAAT TGACCAGCAA
CAGCAACAGC TAACCCAGGC AATTAATCAC TTAATTGCTC ATTTACAACA CTGCCAACAT
CACCTGTGCC CAGATTGCGA TAATTTCCAA CTCATTGATA GCGATATTAT GTTGCTAGAA
GATGAGGAGC TACAGCAGCA ACTACATCAA CATATTAATC AATTTAGAGT TTGCGCAGCC
GTCGCGGTTG ATCGGATTTT TAATCAACAT GCAGCAGAAA TGTCGTCATT AGACGACCCT
TATTTAGCCA ATCGTAGCGG TGATATTATT TGTTTGGCTA AACGCCTGAC CAGTGCTTTG
CATGGCCATT TGCAATGGGA CTTATCAACA CTCGCAGAAG ACACCATTTT GCTCGCTGAT
GATTTAACTC CTGCTGAATT TGCCATATTG CCACTAACCC ACATTACCGG ACTCATTCTC
GAATCTGGAG GCCTAACAAG CCATACTGCG ATTTTAGCTC GGGCAGCGGG TATTCCAGCG
TTACTTAATT ATCAATTCTC ACAATCTGAA AACCTCATCA CAGATGGCTC GCAGCTCATT
TTAGATGGTA TGTCAGGTGA GTTACATATC GCCCCATCAC CTGAACTTTT CGACCAGTTA
AAGCAAAAAC AACAACAAGA ATTGCTGCGT CGTCAAGCAT TGATGATTTA TAAAGATAAG
CCCAGTCAAA CCCTTGATGG TCATAAGATC ACTTTGCTGG CCAATGTGGG AAATCTGAGT
GAAATATCTC ATACAGCCGA AGTCGGAGCA CAAGGTATTG GCTTGTTTCG TACCGAATTT
TTATTGATGA ATGCTAAAGC GTTACCCGAT GAGCAGCAAC AATATAAACT CTATAGCGAT
GCTCTGCATA GTTTACAAGG GGACGTGTTG ACTATTCGAA CGTTTGATAT TGGCGCAGAT
AAAGAGATCC CTTGTTTGCC GCAAAATAAC GAAGATAACC CTGCCCTTGG TATTCGTGGT
ATTCGCTATA GTTTGGCGCA CCCAGAGACC TTTATCCCCC AAGTAAAAGC GATACTTCGG
GCGGCAAACC ATGGCCAAGT TCGATTAATG TTTCCGATGG TTAGCCAGGT TGAAGAACTT
GACGCCGCGT TTTTATTAAT TGAACGTGCC AAAGCGGAGT TAATTGAACA AGAAAAAGGT
TTTGGTACTT TGAGCTACGG TATTGTGGTT GAAACCCCAG CAGCAGTAAT GAATCTACCC
AGCATGCTGC CACTGCTTGA TTTTGTCAGT ATCGGCACCA ATGATTTAAC TCAGTATACT
TTAGCGGCCG ATCGAACAAA TCCGCATTTA GCCAAACAAT ATCCGCCTTT GTCACCTGCT
GTTATCCAGT TAATTTCCAT CACCATAAAC CACTGTAAAA AGGCAAACGT TAAAGTCTCT
TTATGTGGTG AACTTGGTAG CGATCCACGC GTCTTACCTT TATTAGTCGG ACTAGGGCTT
GATGAATTGA GTATCAACCC AGCTAATTTA TTAGATGTAA AAGTGGCATT GATTAAGGGG
CATTACGCAG AATATGTCCG CCATGCACAA CACATTGCTT TGTTAACTCG AATTACTGAT
ATACGCTCAG CCATTAACGC TTTTGCACTT GATTACAATC AATAG
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| Protein sequence | MSINGIVVSA GIAFGKALTI TTQLPPLDFK LLSIEQIDQQ QQQLTQAINH LIAHLQHCQH
HLCPDCDNFQ LIDSDIMLLE DEELQQQLHQ HINQFRVCAA VAVDRIFNQH AAEMSSLDDP
YLANRSGDII CLAKRLTSAL HGHLQWDLST LAEDTILLAD DLTPAEFAIL PLTHITGLIL
ESGGLTSHTA ILARAAGIPA LLNYQFSQSE NLITDGSQLI LDGMSGELHI APSPELFDQL
KQKQQQELLR RQALMIYKDK PSQTLDGHKI TLLANVGNLS EISHTAEVGA QGIGLFRTEF
LLMNAKALPD EQQQYKLYSD ALHSLQGDVL TIRTFDIGAD KEIPCLPQNN EDNPALGIRG
IRYSLAHPET FIPQVKAILR AANHGQVRLM FPMVSQVEEL DAAFLLIERA KAELIEQEKG
FGTLSYGIVV ETPAAVMNLP SMLPLLDFVS IGTNDLTQYT LAADRTNPHL AKQYPPLSPA
VIQLISITIN HCKKANVKVS LCGELGSDPR VLPLLVGLGL DELSINPANL LDVKVALIKG
HYAEYVRHAQ HIALLTRITD IRSAINAFAL DYNQ
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