Gene Sfri_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1767 
Symbol 
ID4277546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2074442 
End bp2074951 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content43% 
IMG OID638134551 
ProductPTS system glucose-specific transporter subunit 
Protein accessionYP_750455 
Protein GI114562942 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTTT TAAGCCGTAT TAGACGACTT ATTTCTGGCC AACCACCATT AACAGGTGGT 
ATTGCCATTT ATGCACCTGT ATCTGGTGAT ATTGTTGCAA TTGAAAAAGT ACCCGACGTG
GTATTTGCTG AAAAAATTGT TGGCGATGGC ATTGCTATCG ACCCAAAGGG CGAATTTATT
GTCGCTCCGA TAGATGGCAC CATAGGTAAA ATTTTTGAAA CCAACCATGC ATTTAGCATT
GAGTCTCCAC AAGGGCTTGA ACTGTTTGTG CACTTTGGGG TTGGAACCGT TGAACTGCGA
GGTAATGGCT TTAAACGTTT GGCCGAAGAA GGTCAGCAAG TTAAAGCCGG TGAACCGATT
TTGTCTTTCG ATCTTGCCTA TTTACGCGGC AAAGTCGACA GTTTACTGAC TCCGGTAGTG
CTGGCCAATA TGGAAGACGT TAAACAATTA GATAAGGCTC AAGGCAGCGT TGTTGCTGGT
AAAGATATTA TTTTTACGGT GCAAATGTAA
 
Protein sequence
MGFLSRIRRL ISGQPPLTGG IAIYAPVSGD IVAIEKVPDV VFAEKIVGDG IAIDPKGEFI 
VAPIDGTIGK IFETNHAFSI ESPQGLELFV HFGVGTVELR GNGFKRLAEE GQQVKAGEPI
LSFDLAYLRG KVDSLLTPVV LANMEDVKQL DKAQGSVVAG KDIIFTVQM