| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1764 |
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| Symbol | |
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| ID | 4277543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2071991 |
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| End bp | 2072701 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134548 |
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| Product | peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins |
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| Protein accession | YP_750452 |
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| Protein GI | 114562939 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.357856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAATAA GCTCACAGTT TTCTTCGATT AATATCCCTA GCGAGCAAGC TAAATTATAC
GGCTTAGACG ATCGACATTT AGTTTCAATT GGACAGTTTT TGCTTGAACA ACGCACTGCA
ACTGCATTTC TGCAGTTGCA ATGTGCGGCA TCTGTTGCGG GGTTTGATGT ACAAATATGT
TCTGCATATA GACCATTTGA TCGTCAATTG AGTATTTGGA ACGCCAAAGC CACAGGTCAG
CGACCATTAC TCGACCAAGA CTCAAATCCA GTTGAGTTTA CGTCACTCAC GCCACAACAA
CTGATTGATA CCATTTTGAT ATGGTCTGCA CTCCCTGGCG CATCTCGGCA TCATTGGGGC
ACCGATTTCG ATATATATGA TGCAAATAAC ATTAGCAAAC AAGCACTGCA GTTAATCACT
GCAGAATATA CAGCCGATGG CCCTTGTGCT CATCTACATA AATGGCTTAT CTCGCATGCT
GCTGATTTTG GATTTTATTT TCCCTACCAG CCGGATTTAA GTGGTGTTAG TCCTGAGCCA
TGGCACATGA GCTATTTTCC TGTCGCTAAT GAGTTGTTGG AGCAATTTAG CGCTGATGAA
TTTGCAAAAG TGTTGTCTGC GGCAGAAATA TCGTTAAAAT CACCCTTAAT TGAACGACTA
ACAGAGTTAG TTAATCATTA TGTTTTCTTT GTTGCGCCCT CTCCGGCTTA G
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| Protein sequence | MQISSQFSSI NIPSEQAKLY GLDDRHLVSI GQFLLEQRTA TAFLQLQCAA SVAGFDVQIC
SAYRPFDRQL SIWNAKATGQ RPLLDQDSNP VEFTSLTPQQ LIDTILIWSA LPGASRHHWG
TDFDIYDANN ISKQALQLIT AEYTADGPCA HLHKWLISHA ADFGFYFPYQ PDLSGVSPEP
WHMSYFPVAN ELLEQFSADE FAKVLSAAEI SLKSPLIERL TELVNHYVFF VAPSPA
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