| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1757 |
|---|
| Symbol | |
|---|
| ID | 4277536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2065397 |
|---|
| End bp | 2066479 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638134541 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_750445 |
|---|
| Protein GI | 114562932 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.805933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAA TTTTAACTGA TTGGTACAAA ACCCGTTTTA GTGACCCACA AGCCATAACG
TTAATGTTTA TCATTATTGG GATTGGTCTT GCATTGTACT TTGGTTCCGG ATTACTTGCG
CCATTACTGG TTGCTTTGGT GTTAGCTTTT TTATTAGAGT GGCCAGTAGC ACAGATGTCG
CGACTGGGTA TAAGCCGAAC CGCTGCTGCA ACAATTGTGT TGGTGGTTTT TTTAGGGTTG
ATGATTATTT TGACGTTTGG TTTAGTGCCC AGTATTTGGC GCCAAGGAGT GTCATTGGTC
ACCGATTTAC CTTCTATGAT CGATAAGGGC ATGATAATCG TGCGCGAATT TAGTGCTGAT
TACCCGCAGT TTGTGAGTGC ATCGCAACTT GATTCGATGA TGGAAGAAAT CAACAAGATG
CTTGATACAC AGCACCTGAT TGATTTAGGT AAACAAATTC TGGGTTATTC TGCGTCATTA
TTAGTGTTAA TGGTGTACGC GATTTTAGTA CCATTATTGG TATTTTTCTT TTTAAAAGAC
AAAGAGTTTT TATTAAACGG TAGCAAACGA TTTTTCCCGT CTAACCGTGG TCTTGCACGA
AAAGTTTGGT TTGAAATGGA CCAACAAATT TTTAATTATA TTCGCGGTAA AGTGATTGAG
ATTGTTATTA TTGGCGTAGC CAGTTATATC TTTTTTGCTA TCATGGGGTT GCGTTATTCA
GCGCTACTGG GCGTATTAAC AGGTTTGTCG GTATTGATCC CATATGTTGG CGCAACATTG
GTTACATTGC CGATTGCGTT AGTGGCATTT TTTCAGTGGG GTTTTAGTGC TGAATTTGGT
TATTTAATGT TAGGTTATGG GATTATTCAG GCGTTAGATG GCAATGTGTT AGTACCGCTA
CTCTTTTCTG ATGCTGTTGA TTTACATCCC GTTGTGATTA TTGCTGCGGT GTTAGTATTT
GGTGGCTTAT GGGGCGTTTG GGGAGTCTTT TTTGCCATAC CACTAGCTTC GTTAGTCAAA
GCCGTCATCA ATGCTTGGCC GAATAACCAA GAGCAACAAC GAGTCAAGTT TGACAGTGAA
TAA
|
|---|
| Protein sequence | MLEILTDWYK TRFSDPQAIT LMFIIIGIGL ALYFGSGLLA PLLVALVLAF LLEWPVAQMS
RLGISRTAAA TIVLVVFLGL MIILTFGLVP SIWRQGVSLV TDLPSMIDKG MIIVREFSAD
YPQFVSASQL DSMMEEINKM LDTQHLIDLG KQILGYSASL LVLMVYAILV PLLVFFFLKD
KEFLLNGSKR FFPSNRGLAR KVWFEMDQQI FNYIRGKVIE IVIIGVASYI FFAIMGLRYS
ALLGVLTGLS VLIPYVGATL VTLPIALVAF FQWGFSAEFG YLMLGYGIIQ ALDGNVLVPL
LFSDAVDLHP VVIIAAVLVF GGLWGVWGVF FAIPLASLVK AVINAWPNNQ EQQRVKFDSE
|
|---|
| |