Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1755 |
Symbol | |
ID | 4277534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2063553 |
End bp | 2065022 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638134539 |
Product | peptidase M48, Ste24p |
Protein accession | YP_750443 |
Protein GI | 114562930 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTAAAT TATCATTATC GACCTTTTCA AAATCACTGG CTGCTAGCGC TATTAGTGTG CTTTTTGCTG CCAGTATTGG CCACAGTTTT GCCAATAATG ATCTTCCAGA TCTAGGTACC GCAGCGGTCA ATACTTTTAG TTTAGAAAAA GAAACTGTCT ACGGTGACGC TTATATGCGC GTTATTCGTT CATCGGCACC GGTACTCAGT GATCCAGTGT TAACCCAATA TTTATCTGAA CTGGGTAACA AGCTAGTTGC TAATGCCACG GGGGTAAAGA CACCATTTTA TTTCTTTTTA CTCCGCAATG ATGAAATCAA CGCATTTGCG TTCTTTGGTG GTCATGTTGG CGTACATACG GGTTTATTTT TAAATGCCGA CAACGAAAGT GAGCTTGCAT CAGTATTAGC CCACGAAATT ACCCACGTGA CTCAACGCCA TCTAGCACGA TCTCTTGAAG CACAACAAAA AAGCTCGACT GCAACGATTG TGGGAATGTT AGGGGCTATT TTATTAACAA TTGCTGCACC TCAAGCCGGT ATGGCTGCCT TGGCGACAAC TCAAGCATTA GCAACGCAAT CTAAAATAAA CTATACCCGC TTACATGAAA AAGAAGCTGA TCGTATTGGA ATGCAAATTC TTGTCGATGC TGGATTTGAT CCTAATGCTG CTGCTACATT TTTTGGTCAA TTAGCAATTC GCTATCGTTT TACCACAACA CCACCACAAA TGTTGCTGAC GCATCCATTG CCAGAATCAC GTATTACTGA GGCTCGTAAC CGCGCAGCTC AGTACCCTAA ACGTAATGTC CCTAACAGCC TTAACTTTCA GCTAGCTAAA GCCCGTATCC AAGTTCGCTT TTCAAGTTTT AGTGATGATG CCGCGTTATC TTTGTTTGAA CAACAACTCA AAAAGAATGA GTATTCTTTT AAACAAGCGG CACTCTATGG CAAAGCGTTA GCACTTTTCC GTTTGGAAAA ATTTGCTCAA GCTGAAGTGA TCATCGATGA TCTACTAAAA CAAGATGACA ATAATCTGTT CTACATCGAC ACCAAAACAG ATTTGTTAGA TCAGAAAAAA GATTTTGCAG GCGCAATAGC ATTATTAGAA GCTCAGCGGA AATTGAAACC GACTTCGCAA GTGGTCAACA CAAACTTGGC CAATATTTAT GTTCAGGCAG ATCAACCGAA AAAAGCGATT CCACTTTTAG AAGAACTGAT ATTTTTCGAT AAGCAAAATA TGCTGCCGTA TCAAATTATG GCTGATGCAT ATCGTAAGCT AGACAATAAG GCGCTTGAGT ATTATAGCAA TGCTGAACTC ATGGCCTTAT CGGCTAACTA TAAAGGTGCT ATTGACCAAC TCAATTATGC ATATCGCTAT TCTGATGGAC AAAACCTGCA ACTGGCGCGA ATTGAGGCAA GAATAAGACA ATTCAGACAA GCAGATAGGG CAATGGAAGA ATTAAAATAG
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Protein sequence | MSKLSLSTFS KSLAASAISV LFAASIGHSF ANNDLPDLGT AAVNTFSLEK ETVYGDAYMR VIRSSAPVLS DPVLTQYLSE LGNKLVANAT GVKTPFYFFL LRNDEINAFA FFGGHVGVHT GLFLNADNES ELASVLAHEI THVTQRHLAR SLEAQQKSST ATIVGMLGAI LLTIAAPQAG MAALATTQAL ATQSKINYTR LHEKEADRIG MQILVDAGFD PNAAATFFGQ LAIRYRFTTT PPQMLLTHPL PESRITEARN RAAQYPKRNV PNSLNFQLAK ARIQVRFSSF SDDAALSLFE QQLKKNEYSF KQAALYGKAL ALFRLEKFAQ AEVIIDDLLK QDDNNLFYID TKTDLLDQKK DFAGAIALLE AQRKLKPTSQ VVNTNLANIY VQADQPKKAI PLLEELIFFD KQNMLPYQIM ADAYRKLDNK ALEYYSNAEL MALSANYKGA IDQLNYAYRY SDGQNLQLAR IEARIRQFRQ ADRAMEELK
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