Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1751 |
Symbol | |
ID | 4277530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2059795 |
End bp | 2060505 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134535 |
Product | DNA replication initiation factor |
Protein accession | YP_750439 |
Protein GI | 114562926 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.712768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACACAAA ACTCACCAAG ACAATTATCT TTACCCGTTT ATCTACCTGA CGATGAAACC TTTCAGAGTT ATTATCCTGC TTCGGGTAAT GATGAGTTGA TCCAGAAACT TCAAGCTAGC GCTGAAGGCA ATCTAGCGTC TTCTTTATAT GTATATGGCC CAGAAAAGTC AGGCCGAACC CATTTAATGC ATGCAGCTTG TGCACTTGCC AATGACCTAG AACGCCGTAC TCTCTATATC CCACTAGGCA TTCATGCCAG TATTTCACCG GCATTATTTG AAGGTCTAGA GTCTCTGGAG TTAATTTGTA TTGATGATAT TGAAGCCATA GCGGGTCATC CTGTATGGGA AGAAGCTATT TTTCATTTAT ATAATCGTAT AGCTGAGCAA CAAGATTGTC GTTTAATTGT TAACGGAAAG GCATCACCTT CTGAAACCGG TTTTTTATTG CCTGATTTGG TTTCTCGTAT GCAATGGGGA TTAATCTATC AATTACAACC AATGGCAGAC GATGAAAAGC TTGTGGCCTT GCAGCGCCGA GCGGCAATGC GTGGTTTACA GTTGTCTGAT GAAGTAGGGC GCTTTTTACT GACGCGAATG GCGCGTGATT TACGCACCTT GTTTGATGTA CTCGATAAAC TCGATAAAGC TTCTATGGTA CATCAGCGTA AACTGACTAT TCCGTTTATA AAAGAGATGT TGAGGCTTTA A
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Protein sequence | MTQNSPRQLS LPVYLPDDET FQSYYPASGN DELIQKLQAS AEGNLASSLY VYGPEKSGRT HLMHAACALA NDLERRTLYI PLGIHASISP ALFEGLESLE LICIDDIEAI AGHPVWEEAI FHLYNRIAEQ QDCRLIVNGK ASPSETGFLL PDLVSRMQWG LIYQLQPMAD DEKLVALQRR AAMRGLQLSD EVGRFLLTRM ARDLRTLFDV LDKLDKASMV HQRKLTIPFI KEMLRL
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