Gene Sfri_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1750 
Symbol 
ID4277529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2058544 
End bp2059641 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content40% 
IMG OID638134534 
Producthypothetical protein 
Protein accessionYP_750438 
Protein GI114562925 
COG category[S] Function unknown 
COG ID[COG3249] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0668546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAA AACTAATTAA TCTCATTGCG TTACCACTAA TTGCGTTAAC TTCGATTACG 
CTTGTACATG CTGCGGAAGT GAACAAGCTT GATGAAGCCG ATATTACGGT AGCATCACGC
GCAAACGATG TGAAAAACAA CGCCCTTAAA GAGGCATTAG CTGCCGTTTT CTTAAAAAAC
TCTGGTCTAC CAAGTGTGGT ATTAAACCCA TTGGTTAAAG CCCAAATTAA TAACCCAGAA
GTCATTTTGA CTCAATATGG TTACTATGAG AAAAATGGCG AACTGATGCT CAAAGCCAGC
TTTGACCATC AACGGGTTAT TTCAACGTTA CGTGAAGCAG GTTTACCTGT TTGGGGCAGT
CAACGCCCAT TAACCTTGTT ATGGATGTCG GTTGATGAAA ATAATGAACC GTCTATTTTA
GCAGATGCAT CTTCGGCCGA TATTCGATCT GAGTTGGCTC AAGAGTCTAG TAACAAAGGC
ATTCCATTAT TGTTGCCAAT AATGGATTTG GATGATGTGA TGCAAGTCAG TATCACTGAT
GTACGTGGAA TGTTTACCGA TGTGCTAGCT AATGCATCCA CTCGTTATCA AGCTGATTAT
TTCGCTATTG CCAATTTGGA TACTCAAGGC GTTAACGTTC ATTACACCAT CAAATTATTT
GATAAAAATA GAACTAATGG TGTGTTACAA CCGTTAATTT CGCAACAAGG TGATGCGACT
GATAATCAAC AAGCCACGAA GCGAATGATG AACATTCTAG CCGATTATTA TATTAGCCAG
TATGCCATAG CCTCTACAGG CAGAGATGTT GCTACCCAAG TTAGCTTTAC TGGGTTAAAT
AACATGACTC AACTGGTACA TGTTGAAACA TATCTTCGCC AGCTCAGTGC GGTAAAATCC
CTTAAACTGA GTCAGTTTAA GGGTGATGCA GCAACATATA CGATAGAATT ATTTAGTAGT
GTAGATGACC TGCAAAGATT GCTTAATATT GATAGCCGGT TATCACAATT AGATACAGTG
GGTAGTGTGG AGTCATTTTA TGAATCTAAG GCCGACAATC CAGCGCCTAA GTTACTTTAT
CAATGGTTGG GCCAATAA
 
Protein sequence
MLKKLINLIA LPLIALTSIT LVHAAEVNKL DEADITVASR ANDVKNNALK EALAAVFLKN 
SGLPSVVLNP LVKAQINNPE VILTQYGYYE KNGELMLKAS FDHQRVISTL REAGLPVWGS
QRPLTLLWMS VDENNEPSIL ADASSADIRS ELAQESSNKG IPLLLPIMDL DDVMQVSITD
VRGMFTDVLA NASTRYQADY FAIANLDTQG VNVHYTIKLF DKNRTNGVLQ PLISQQGDAT
DNQQATKRMM NILADYYISQ YAIASTGRDV ATQVSFTGLN NMTQLVHVET YLRQLSAVKS
LKLSQFKGDA ATYTIELFSS VDDLQRLLNI DSRLSQLDTV GSVESFYESK ADNPAPKLLY
QWLGQ