Gene Sfri_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1748 
Symbol 
ID4277527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2056608 
End bp2056949 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content39% 
IMG OID638134532 
Productglutaredoxin-like protein 
Protein accessionYP_750436 
Protein GI114562923 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000425193 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTG TAGAAAAGAT TAAACAGCAA ATTAGCGAAA ACCCAATTAT TGTGTACATG 
AAAGGTTCAC CTAAATTACC AAGCTGTGGA TTTTCATCTC AAGTTGCTCA AGTGATGATC
AACTGTGGTG AACAATTTGC ATTCGTGGAT ATTTTACAGC ATCCAGATAT TCGTGCTGAA
TTACCAAAAT TCGCTAACTG GCCAACATTC CCACAATTAT GGGTTGAAGG CGAGTTGATT
GGTGGTTGTG ACATTATCAC TGAAATGTTC CAAAAAGGTG AACTTCAACC TATCATTAAA
GCGACTGCTG ACAAATTCCG TACAGAAGAC GCTGCAGAGT AA
 
Protein sequence
METVEKIKQQ ISENPIIVYM KGSPKLPSCG FSSQVAQVMI NCGEQFAFVD ILQHPDIRAE 
LPKFANWPTF PQLWVEGELI GGCDIITEMF QKGELQPIIK ATADKFRTED AAE