| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1743 |
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| Symbol | |
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| ID | 4277522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2049865 |
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| End bp | 2050584 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638134527 |
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| Product | fatty acid metabolism regulator |
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| Protein accession | YP_750431 |
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| Protein GI | 114562918 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02812] fatty acid metabolism transcriptional regulator FadR |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCATCA ATGCCAAAGG GCCAGCGAGT TTTGCCGAGA AATATATTGT TCGTTCCATT
TGGGAAAACA AATTCCCACC GGGATCAATT TTACCTGCTG AACGTGAGCT GTCTGAACTT
ATCGGCGTTA CACGTACAAC GTTAAGAGAA GTATTACAAC GTCTTGCTCG AGATGGTTGG
TTGAAAATTC AACATGGTAA ACCTACCCAA GTGAATAATT TTTGGGAAAC GTCTGGGCTA
AATATTTTAG AAACCATTGC AGACTTGAAT CCTGATGGTT TTCCATTATT AGTCGACCAG
TTAATGGCCG CTCGTGGTAA TGTCAGTAAT ATTTATTTTC GGGCATCTAT CCGTCACAAT
CCTGAAAAAG TAGTTGAAGT TTTAGCGGGT ATTCATAGTT TAGAAAATGA TGCTGAAGCG
TATGCGACAT TTGATTACCA GTTGCACCAT ACATTAGCTT TTGCGTCAGG CAATCCATTG
TATGTGTTGA TTTTAAATGG TTTTAAAGGC CTTTATAATC GTGTTGGTCG ATATTATTTT
TCTAGCCAAG AAGCTCGTGA ATTAACCATG CGTTTTTATC TTAAATTAGA GAAACTGGCT
CAGGATAAAA ATTACTCAGA CGTACCAGCG TTAATGCGTA CAAATGGTAT TGAAAGTGGC
AAAATGTGGC AAAAATTGCG TGATGATTTA CCCGCTGAAA TGGGTCATGA TAAATCATAG
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| Protein sequence | MIINAKGPAS FAEKYIVRSI WENKFPPGSI LPAERELSEL IGVTRTTLRE VLQRLARDGW
LKIQHGKPTQ VNNFWETSGL NILETIADLN PDGFPLLVDQ LMAARGNVSN IYFRASIRHN
PEKVVEVLAG IHSLENDAEA YATFDYQLHH TLAFASGNPL YVLILNGFKG LYNRVGRYYF
SSQEARELTM RFYLKLEKLA QDKNYSDVPA LMRTNGIESG KMWQKLRDDL PAEMGHDKS
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