| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1742 |
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| Symbol | nhaB |
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| ID | 4277521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2047688 |
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| End bp | 2049274 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134526 |
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| Product | sodium/proton antiporter |
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| Protein accession | YP_750430 |
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| Protein GI | 114562917 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3067] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00774] Na+/H+ antiporter NhaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCAA CCAAAAGTCA GGCGCTATTT GTCAACTTTT TAGGCAATTC ACCTAAATGG
TACAAATACG CAATTATGGC ATTTTTAGTC ATTAATCCCC TGCTGTTTTT TTATGTCAGT
CCATTTGTCG CTGGATGGGT ACTGGTAGTT GAATTTATTT TCACCCTTGC CATGGCACTT
AAATGTTATC CACTTCAGCC CGGCGGTTTG CTCGCAATTC AAGCCGTATT TATTGGCATG
ACATCCCCCT CACAAGTTCT ACATGAAATT GAAGCCAACC TGGAAGTATT GTTACTTTTA
GTCTTCATGG TCGCCGGTAT TTACTTTATG AAACAGTTAT TACTGTTTGT ATTTACCAAG
ATGATTACTA AAGTGCGTTC AAAAATCATT GTTTCGTTGA TGTTCTGTAC TGCGTCGGCA
TTCTTATCTG CGTTCTTAGA TGCGTTAACA GTCATCGCGG TTATCATTGC TGTTGCCGTT
GGTTTTTACT CCATTTACCA CAAGGTCGCT TCAGGTAAGA GCTTTAACGA TGGCCATGAC
CATACATCTG AAACAACTGA ACAGTTAAAC AATGAAGAAT TAGAAGCATT TCGTGCATTC
TTACGTAATT TATTAATGCA TTCAGGTATT GGTACCGCTC TTGGTGGTGT CTGTACTATG
GTGGGCGAAC CACAGAACTT GATCATTGCG GCACAAGCCC ACTGGCAGTT TGGTGAGTTT
TTCTTACGGA TGTCACCGGT GACTATGCCG GTATTGGTTG CAGGAATATT CACTTGTTTT
CTTGTCGAAA AATTCAAAGT ATTTGGTTAT GGCGCGCAAT TACCTGGTGC AGTACATAAG
ATTTTAACCG ATTACGCTAA TCATGAAGAC TCACACAGAA CCAACCAAGA TAAAATGAAA
CTGGTTGTCC AGGCTCTTAT TGGAGTTTGG TTAATTGCAG GTTTAGCACT TCACCTAGCT
TCTGTGGGCC TCATTGGTTT ATCGGTCATT ATTTTAGCAA CAGCATTTAA TGGCATAACC
GACGAACATT CTTTGGGTAA AGCGTTTGAA GAAGCCTTGC CTTTCACTGC GCTTTTAGCG
GTATTTTTTG CCATCGTTGG TGTGATCATT GACCAGGAAC TGTTTGCTCC AGTGATCCAA
TGGGCATTAG GTTATGAAGG CAATATGCAG TTAGTGATTT TTTACATCGC TAACGGCTTA
TTATCTATGG TCAGTGACAA CGTGTTTGTG GGCACGGTTT ACATTAATGA AGTGAAAGCT
GCATTGATGA GTGGCCAAAT CACTCGAGAT CAATTTGACT TACTTGCTGT GGCAATTAAC
ACCGGTACTA ACCTACCTTC TGTGGCTACA CCGAATGGAC AAGCAGCGTT CTTATTCTTG
TTAACCTCAG CCATAGCACC GCTTATTCGC TTGTCATACG GCCGTATGGT ATGGATGGCG
TTGCCTTATA CGATTGTATT ATCGATTGTG GGTGTAATGG CCATTGAGTC TGGTTTCTTA
GTCGACATGA CTGATGTTCT TTATGAAACT CAATTAATAA TCCACCACTC TGCCAAAGAC
ATCAGCGGTG CGGTAATGGG TCATTAA
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| Protein sequence | MQATKSQALF VNFLGNSPKW YKYAIMAFLV INPLLFFYVS PFVAGWVLVV EFIFTLAMAL
KCYPLQPGGL LAIQAVFIGM TSPSQVLHEI EANLEVLLLL VFMVAGIYFM KQLLLFVFTK
MITKVRSKII VSLMFCTASA FLSAFLDALT VIAVIIAVAV GFYSIYHKVA SGKSFNDGHD
HTSETTEQLN NEELEAFRAF LRNLLMHSGI GTALGGVCTM VGEPQNLIIA AQAHWQFGEF
FLRMSPVTMP VLVAGIFTCF LVEKFKVFGY GAQLPGAVHK ILTDYANHED SHRTNQDKMK
LVVQALIGVW LIAGLALHLA SVGLIGLSVI ILATAFNGIT DEHSLGKAFE EALPFTALLA
VFFAIVGVII DQELFAPVIQ WALGYEGNMQ LVIFYIANGL LSMVSDNVFV GTVYINEVKA
ALMSGQITRD QFDLLAVAIN TGTNLPSVAT PNGQAAFLFL LTSAIAPLIR LSYGRMVWMA
LPYTIVLSIV GVMAIESGFL VDMTDVLYET QLIIHHSAKD ISGAVMGH
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