Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1733 |
Symbol | |
ID | 4277512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2040345 |
End bp | 2042018 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638134517 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_750421 |
Protein GI | 114562908 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.667013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACCAGC CTTGGATTAA TAATTTACCT GAACATGTTC CGGCCGAAAT CGACCCATCT CAATTCAGTT CTTTAGTACA CATGTTCGAA GATGCAGTAG CAAAATATGC TGACCAACCT GCATTTATTA ACATGGGTGC GACGATGACG TACCGTAAAC TCGAAGAGCG AAGCCGAGCA TTTGCTGCAT ATTTACAAAA CGAACTGCAC TTAAATAAAG GCGACCGTGT TGCCATTATG ATGCCTAATT TGCTGCAATA TCCTATTGCT CTGTTTGGTA TTTTACGTGC GGGAATGGTA GTGGTTAACG TTAACCCACT GTATACGCCA CGGGAATTAA AACATCAATT AGTAGATTCG GGTGCAAGAG CCATCATTGT GGTGTCTAAC TTTGCTAATA CCCTAGAAGA AATTGTTGAT CAAACTCCAA TAGAATCAGT CATTATTACT AATCTTGGTG ATCAACTCAG TGCACCTAAA CGCACTTTAG TTAATTTTGT TGTTAAATAC ATTAAAAGAT TAGTGCCAAA ATATCATTTA CCTCATGCAT TATCATTTCG CGATGCACTC TCTAAAGGCC GACGCCTACA GTACATTAAA GCCGATATTA GTGGCGAGGA TTTGGCTTTT TTACAGTATA CCGGTGGAAC GACAGGGGTA TCTAAAGGTG CCATGTTAAG CCATAAAAAC GTAGTAAGTA ACGTTTTACA AGCTAGTGGT GCTTATTCGC CAGCGCTTGA TGATGGTGCT GAGTTTGTGG TGACAGCATT GCCTCTGTAC CATATTTTTG CCCTAACAGT GAATTGTTTA TTGTTTATAC ATAAAGGTAG CAAAAATTTA CTGATCACTA ACCCTCGCGA TATCCCAGCA TTTGTGGGTG AATTGAGAAA GTACCCGTTT ACGGTATTAA CGGGTGTTAA TACCTTATTC AATGCTTTAG TGAATAACGA AGAATTTACT CAACTTGATT TTTCTGGTTT AAAGTTGTCT ATTGGCGGCG GGATGGCGGT GCAGCGCGCC GTAGCTGATA AATGGCAAAA CCTAACTAAG ACACGCCTAC TCGAAGGTTA TGGTTTAACT GAAGCCTCAC CATTGGTCAC ATGCTGCCCA TATAACCTCA GTGGTTACAA TGGTTCAATT GGCTTTCCTG CGCCTTCAAC GTTCATTCAA ATACGTGATG ATGATGGCAA AGTTCTAGCC CAGGGCGAAA CTGGTGAATT ATTTGCTAAA GGCCCACAAG TGATGCAAGG TTATTGGCAG CGTCCGGAAG AAACGGCGAG TGTCATTGAC AAAAACGGTT GGTTAGCTAC AGGTGATATT GGTTATATGG ATGAAAAAGG TTTCTTTTTC ATTGTCGATC GTAAGAAAGA TATGATTTTA GTGTCAGGTT TTAATGTATT CCCGAATGAA GTGGAAGAGG TTGTTGCATT ACATCCTAAA GTTATCGAAG TCGCTGCGGT TGGCGTTCCT AACGATGCCA GTGGCGAATT AGTGAAGATT TTTGTGGTAG CAAAAGACAA ATCATTAACC GAAGAAGAGC TGATTAAGCA CTGTCGTCAT CATTTAACGG GATATAAAGT TCCTAAGCTG GTAGAATTTA GAGACGAATT ACCGAAAACC AATGTGGGTA AAATTTTACG CCGACAACTT CGAGATGAAG TTAAGAAAGC GTAA
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Protein sequence | MDQPWINNLP EHVPAEIDPS QFSSLVHMFE DAVAKYADQP AFINMGATMT YRKLEERSRA FAAYLQNELH LNKGDRVAIM MPNLLQYPIA LFGILRAGMV VVNVNPLYTP RELKHQLVDS GARAIIVVSN FANTLEEIVD QTPIESVIIT NLGDQLSAPK RTLVNFVVKY IKRLVPKYHL PHALSFRDAL SKGRRLQYIK ADISGEDLAF LQYTGGTTGV SKGAMLSHKN VVSNVLQASG AYSPALDDGA EFVVTALPLY HIFALTVNCL LFIHKGSKNL LITNPRDIPA FVGELRKYPF TVLTGVNTLF NALVNNEEFT QLDFSGLKLS IGGGMAVQRA VADKWQNLTK TRLLEGYGLT EASPLVTCCP YNLSGYNGSI GFPAPSTFIQ IRDDDGKVLA QGETGELFAK GPQVMQGYWQ RPEETASVID KNGWLATGDI GYMDEKGFFF IVDRKKDMIL VSGFNVFPNE VEEVVALHPK VIEVAAVGVP NDASGELVKI FVVAKDKSLT EEELIKHCRH HLTGYKVPKL VEFRDELPKT NVGKILRRQL RDEVKKA
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