| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1725 |
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| Symbol | |
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| ID | 4277504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2032957 |
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| End bp | 2033970 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134509 |
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| Product | permease |
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| Protein accession | YP_750413 |
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| Protein GI | 114562900 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCAGA TATTTTCTGA TTTTGCATCT TGGCTTATTT TTAGTGTATT GGGGTTGTCT
GCTGAGACAA AACTCGGTGA TGCGCTGCAT TTTTTTGTTG AAGACGTGAC TAAAATTTTT
GCTTTACTAC TGGTGATGAT TTATTTCATT GCCTTAATCC GGGCTTCGTT AAATGTTGAA
CGGGTCAGAG ATTATCTAGC TGGAAAGCAC CGAGGATTAG GCTATTTAAT GGGATCTGGT
TTTGGTGTCA TAACGCCGTT TTGTTCTTGT TCGAGCATTC CTGTATTTTT AGGCTTTACC
TCTGCCGGGA TCCCATTGGG GATCACTATG AGCTTTTTGA TTACCTCGCC TTTAATCAAC
GAGGTCGCAA TATTACTATT GATGAGCTTA TTGGGACTCA AATTTACTTT ATTGTATATT
GCCGTTGGAA TGAGTGTGGG GATGTTAGGC GGTTTGTTTC TCGACAGTAT TAAGGCTGAA
CGTTGGCTAC AATCGTTTGC GGCCGAAGCC TTAAAGCGTG GCCAGCAGAA GGGGGTTGGC
AATACGGCTG ATGAGAGTGC CAATGTGCAA ACTATGTCGT TACAACAAAG ACATCAATTT
GCCAAAACTG AAATGCTAGA TATATTCGGC CGTGTCTGGA AATGGGTCAT TATTGGTGTG
GGGTTAGGCG CCGCATTACA TGGTTTTGTG CCAGATGGTT GGATTGAAGC ACATTTGGGC
GACGGACAAT GGTGGTCTGT ACCCGCTGCG GTACTGCTGG GTATTCCACT TTATTCCAAT
GCGACAGGCG TTATTCCTAT TATGGAAAGC CTGATTGTTA ATGGGTTACC GATTGGTACT
ACGTTGGCAT TTTGTATGAG TACCGTAGCA GCCAGTTTTC CTGAGTTTAT TTTGTTAAAA
CAAGTGATGC AATGGCGCTT GCTGGCGATA TTATTCAGCA TGCTATTAGT TTCATTCACT
TTAGTGGGGT GGATATTTAA TGCATTTGCT CCGTTGCTAT CATCTACGAG TTAG
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| Protein sequence | MFQIFSDFAS WLIFSVLGLS AETKLGDALH FFVEDVTKIF ALLLVMIYFI ALIRASLNVE
RVRDYLAGKH RGLGYLMGSG FGVITPFCSC SSIPVFLGFT SAGIPLGITM SFLITSPLIN
EVAILLLMSL LGLKFTLLYI AVGMSVGMLG GLFLDSIKAE RWLQSFAAEA LKRGQQKGVG
NTADESANVQ TMSLQQRHQF AKTEMLDIFG RVWKWVIIGV GLGAALHGFV PDGWIEAHLG
DGQWWSVPAA VLLGIPLYSN ATGVIPIMES LIVNGLPIGT TLAFCMSTVA ASFPEFILLK
QVMQWRLLAI LFSMLLVSFT LVGWIFNAFA PLLSSTS
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