| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1721 |
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| Symbol | |
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| ID | 4277500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2029046 |
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| End bp | 2029930 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134505 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_750409 |
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| Protein GI | 114562896 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCA TTGATTTAGT GGCGCTTAGA GATGTTATGG ATTTGATGCT AGATGCTGTT
TGCGTGGTTG ATAAAGCGGG AACTTTTGTT TTTGTTAGTG CTGCATTTGA AGATATTTTT
GGATATTCGC CAGACGAAGT GATAGGCAAA CCCATGATTG ACCATGTTTA TTCAGAAGAT
GGCATAAAAA CACTTAAAGT TGTTGAGTCA TTGATGGAGG GTAAAAAACA ACCTCGTTTT
GAGAATCGTT GGGTCCGTAA AGATGGCAAA ATTATCGACA TTCTTTGGTC GGCACGATGG
TCTGAAGACC ACCAATTTAG AATTGCGATT GCTCACGATA TTACTGAACG AAAATTAATG
GAGCAGCAAC TGCATTACAT TGCAGGACAT GATCCATTAA CTGAATTACC TAATAGAGCA
TTGTTGTTTG GGCGCTTACA AACGTCACTT GGATTAGCAC GTCGTGAAGG AAGCCATCTT
TCGTTGTTAT TTATTGATAT TGATGGGTTT AAACATGTTA ATGACAGTTA TGGTCATCTT
GTAGGTGATA AGCTACTTAA GAATATAGCT CAACGTTTAC GTGATTGTGT CCGTAAGTCC
GATACGGTTG GACGTTTTGG CGGCGATGAG TTTGTGGTGG TGTTAAATGG CATAGATTCA
TTTGATAATG TGCTGGTTAT TACTGAAAAC ATTCGTGCTC AGCTCGAAAA AACTTATCAA
TTTGATGATC TTAATTTGCA ACTTTCACCG AGTATCGGTG TTGCTCGCTA CCCAGATAAT
GGTGATGATG AGCAGCAATT ACTTCAGTAT GCAGATCAAG CAATGTATAG AGCAAAAAAT
GCCGGCGGTA ACCGAGTTGA TGTTGGTGTA GACAATGCTA CCTAG
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| Protein sequence | MKTIDLVALR DVMDLMLDAV CVVDKAGTFV FVSAAFEDIF GYSPDEVIGK PMIDHVYSED
GIKTLKVVES LMEGKKQPRF ENRWVRKDGK IIDILWSARW SEDHQFRIAI AHDITERKLM
EQQLHYIAGH DPLTELPNRA LLFGRLQTSL GLARREGSHL SLLFIDIDGF KHVNDSYGHL
VGDKLLKNIA QRLRDCVRKS DTVGRFGGDE FVVVLNGIDS FDNVLVITEN IRAQLEKTYQ
FDDLNLQLSP SIGVARYPDN GDDEQQLLQY ADQAMYRAKN AGGNRVDVGV DNAT
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