| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1716 |
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| Symbol | hisH |
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| ID | 4277495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2023080 |
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| End bp | 2023742 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134500 |
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| Product | imidazole glycerol phosphate synthase subunit HisH |
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| Protein accession | YP_750404 |
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| Protein GI | 114562891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0118] Glutamine amidotransferase |
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| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACAAG TATCGAATGC TTCAAATACT GGCAATGATC TTACTGTGAT TATTGATACC
GGTTGTGCCA ATTTAAGCTC TGTACGGTTT GCTTTTGAGC GCCTTAACGC CAATGTTATT
GTCAGCGCTG ACTTTGATGT CATCCGCAGC GCCGCAAGAG TAGTACTGCC TGGTGTTGGC
ACCGCAGGTG CGGCCATGGA CGCCTTAAAA CAAAAGAACC TTATCGAGCT AATTAAAAGC
TTAACACAAC CTGTTATGGG CGTCTGTTTA GGCATGCAAA TGCTGGCATC TTTGTCTAAT
GAACATGGCG GTCGCAGCGA ACAAAATATC ACCTGTTTAG GATTAGTGCC CACTGATATT
GGCGACTTAG ACAGCAAAGG CTTACCGTTG CCGCACATGG GCTGGAATCA AATTGAGGTA
AGCGACCATC CTTTATTTGT TGGTATAGAA AATGGCAGCT ACGTGTATTT TGTTCACAGC
TATCGTGCAC CAATCAGTGA GTACACCTTA GCCAGCAGCA CATATGGCGA GTCATTCAGT
GCAGCCATTG GTAAAGGTAA TTTTTTTGGG GTGCAATTCC ACCCGGAAAA AAGTGCCAAA
GTGGGCGCGA AAATTTTACA GAACTTTTTA CAGATGGGGT TAAACATGGG GGCACCACAA
TGA
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| Protein sequence | MTQVSNASNT GNDLTVIIDT GCANLSSVRF AFERLNANVI VSADFDVIRS AARVVLPGVG
TAGAAMDALK QKNLIELIKS LTQPVMGVCL GMQMLASLSN EHGGRSEQNI TCLGLVPTDI
GDLDSKGLPL PHMGWNQIEV SDHPLFVGIE NGSYVYFVHS YRAPISEYTL ASSTYGESFS
AAIGKGNFFG VQFHPEKSAK VGAKILQNFL QMGLNMGAPQ
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