| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1707 |
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| Symbol | |
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| ID | 4277732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2011639 |
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| End bp | 2014506 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134491 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_750395 |
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| Protein GI | 114562882 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGTTC GAAAGTCGTT GCTCGCGATG TCGATATCAT CATTAATGGT ATTCAATGTT
GCTGCCCAAG ATGTGCTTAT TTCAGAGTAC ATAGAAGGAA GCAGTAATAA CAAAGCTATA
GAATTGTACA ATCCAAGTTC GACAGCGATA GATTTGAGTG ATTATGTGTT GTCATTTTAT
TTTAATGGCA ATACTGCAGC GACAACCAAT ATTACATTGG ATGGTAATAT TGCAGCCAAC
TCAACGTTTG TTATTGCCGA TAATGATGCA TCAGCAGAAA TCCTTGCGCT TGCCCAACAG
ATTAGTACTG CGAGCTTTTT TAATGGTGAT GATGCCATTG TACTCAGTCA CAATAACCTA
GTTATCGATT CCCTAGGACA AGTGGGTGTC GATCCTGGAT CAGAATGGGG AACGGGTGAT
TTATCGACAC AAAACAACAC TCTTCGTCGT GACGCCAGTC AATTAGTTGC AGATATTATT
ACTGACGATG AAGTCACATT AGCTGGCTGG CAAGGTTTTG CTCAAGATGA CATCAGTGAT
TTAGGTGTTT TCGCAGGTAA TGATTCTGGC CCAACAGATC CGGTAGACCC AGTAGACCCA
ACTGAGCCAA TAGAATTTGT CTGTTCACAA AGTGCCGTCG CAATCCATGA CATTCAAGGT
ATAGATGCAG CAAGCCCATT AGTGGGTTCA GACGTGGTGG TTGAAGCTAT TGTGACAAGT
AATCAACAAG CTGGGCTAAA GGGTATCTTT ATCCAAATGG CCGACAGCGA AGTCGATACT
GACATTAACA CCTCAGAAGG TATTTTTGTT TACAGCGGTA ATCAACCATT GGATGTGAAT
GCCGGAGATC GAGTTCGTTT ACAAGCTTCT GTTGCCGAAT ACCAAGGTAC AACTCAGTTG
TCTAATGTGA CTCAATTTGC TCTATGTGGC ACTAACCTAC CATTGCCTGT GGTTGCTACT
GTCACATTGC CGTTAGCCGA CAATCAACAA CTTGAGCGTG TTGAAGGCAT GCGGGTATTA
TTCGATCAAT CTCTAGTGGT CAATGAAGTG TATAACTTGG GCCGTTATGG TGAAGTATCA
TTAGGCAGTA GTCGCCATTT TATCGGTACT CAAGTTGCTT TACCTGGTGC CGCAGCGCTG
GCAGTGACTG AAGCGAATGC CAGAGATAGT ATTTTGTTGG ATGATGGCTT AACCAGCCAA
AATCCTGAAC AGATACCTTA TCCAGCTCCT GGGTTATCAG CCTCAAATAC CTTGCGGGTA
GGCGATTCTG TTACCGGGCT CGAGGGTATT ATGCATTATG GCTTTAGCCA ATATCGTGTG
ATGCCAACTC AAGTGGTCAA TGTAGTGCAA AGTAACCCGC GACAATCTAC TCCAGAGTTA
GCGCTTGGCG CAGATCTTCG TGTCGCCAGT TTCAATGTGC TTAATTATTT CAACGGTGAT
GGCAACGGCA ATGGATTTCC GACTGATCGC GGCGCCGACA CATTATCTGA ATTTGAGCGT
CAACGCGTGA AAATTATCAG TGCAATGCAT GCCATTAACG CTGATGTATT TGGTTTAATG
GAAATTGAAA ATGACGGCTA TGGTAGTGAT TCAGCCATTA ACGACTTAGT CAGCGGATTA
AACCAAGCTA TGGGAGCGGA GGTATACGCT TATGTTGTGC CTTCAGTGAC ACAAATAGGT
ACCGATGCAA TTGCAGTGGG AATGATCTAT CGTGCTGATA AAATAACTCC AACAGGTGAT
GCTCAAATAT TATCATCAGC TAATTCACCT GTTGATGGAA ATGGCACCGC GTTATTCGAT
GACGGCAAAA ACCGTCCAAT GTTAACTCAA TCATTTATGT TGAATGATCG GAATGACAGC
ATTGTTGTTG CCGTAAACCA TTTAAAATCA AAAGGAAGCA GTTGCGACAG TATCAATGAC
CCCGATTTAT TTGATGGCCA AGGAAACTGT AATTTAACTC GTACTCGAGC AACAGATGCC
ATTGGGCAAT GGTTAATGGC TCAGTATCCA GAGCAAAAAA TCTTGGTAAT AGGTGATTTA
AATGCTTATG CCAAAGAAAA TCCGCTCACT CAACTTGCCA ACCATGGCTA TAGCGAGCTT
AATGCGCATT TTGGTAATGT TAATTCATAC TCCTACATGT TCTCGGGTGA GTCAGGTCAA
TTAGACCATG CATTAGCAAA CCAAGCGTTA TTGGATAATG TATTAGCGAT AACGGAATGG
CATATTAATG CTGACGAGCC AAGGATCCTT GATTATAACG AAGAGTATAA ATCAGCAGCT
CAGATACTAG ACTTGTATCA CGCTGATGGT TTCCGTTCTT CAGACCATGA TCCAGTGATT
GTTTCGCTGC AATTTGAGAT CCAAAATGAG CTCCCAATCG CCAGTTTTGA CCATCAACTT
AATGGTAGTC AGCTACAGGT TCAGTCTACC TCTATTGATA ATGATGGTGA CATTACGTTA
TTAGAATGGG ATTTTGGTGA TGGTACTATC GTTAATGGTA CTGTTGCTAA TGGAGAAACG
GCTTCGCATC AGTATCAGCA ATCAGGCAAT TATCAAGTCC AGCTTACTGT TACTGACAAT
AAAGGCGACG TTGTGACAAC CGTTAAAACC ATAAATGTGC TTATTGAACC GACCAATATC
GCGCCTACTG CGCAAATACA CCTGGTCAAC TTATGGTTTA TGAAATTATT TATTTCAACT
AGCTATGACC AAGACGGTTT TATTAAACGT CAAAACTGGC TATTTAACAA TGGTCGTAAA
GCACATGGGC CAATCGCGTT TAGTTTCAGT CGTCGCGATA AAGCTGTGTC ACTGACGGTT
GTCGATAATG ACGGTGAAAA AGACACAGCA ACACTCAATT TTAGATAG
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| Protein sequence | MLVRKSLLAM SISSLMVFNV AAQDVLISEY IEGSSNNKAI ELYNPSSTAI DLSDYVLSFY
FNGNTAATTN ITLDGNIAAN STFVIADNDA SAEILALAQQ ISTASFFNGD DAIVLSHNNL
VIDSLGQVGV DPGSEWGTGD LSTQNNTLRR DASQLVADII TDDEVTLAGW QGFAQDDISD
LGVFAGNDSG PTDPVDPVDP TEPIEFVCSQ SAVAIHDIQG IDAASPLVGS DVVVEAIVTS
NQQAGLKGIF IQMADSEVDT DINTSEGIFV YSGNQPLDVN AGDRVRLQAS VAEYQGTTQL
SNVTQFALCG TNLPLPVVAT VTLPLADNQQ LERVEGMRVL FDQSLVVNEV YNLGRYGEVS
LGSSRHFIGT QVALPGAAAL AVTEANARDS ILLDDGLTSQ NPEQIPYPAP GLSASNTLRV
GDSVTGLEGI MHYGFSQYRV MPTQVVNVVQ SNPRQSTPEL ALGADLRVAS FNVLNYFNGD
GNGNGFPTDR GADTLSEFER QRVKIISAMH AINADVFGLM EIENDGYGSD SAINDLVSGL
NQAMGAEVYA YVVPSVTQIG TDAIAVGMIY RADKITPTGD AQILSSANSP VDGNGTALFD
DGKNRPMLTQ SFMLNDRNDS IVVAVNHLKS KGSSCDSIND PDLFDGQGNC NLTRTRATDA
IGQWLMAQYP EQKILVIGDL NAYAKENPLT QLANHGYSEL NAHFGNVNSY SYMFSGESGQ
LDHALANQAL LDNVLAITEW HINADEPRIL DYNEEYKSAA QILDLYHADG FRSSDHDPVI
VSLQFEIQNE LPIASFDHQL NGSQLQVQST SIDNDGDITL LEWDFGDGTI VNGTVANGET
ASHQYQQSGN YQVQLTVTDN KGDVVTTVKT INVLIEPTNI APTAQIHLVN LWFMKLFIST
SYDQDGFIKR QNWLFNNGRK AHGPIAFSFS RRDKAVSLTV VDNDGEKDTA TLNFR
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