Gene Sfri_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1703 
Symbol 
ID4277728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2008620 
End bp2009117 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content42% 
IMG OID638134487 
Producthypothetical protein 
Protein accessionYP_750391 
Protein GI114562878 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.782315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTA ATGAAGTGGA GCATTTTGCG GTGATAACCA ATAAAATCTG GGTTGATGCT 
GATGCTTGCC CTAACCCAGT TAAAGAGATG TTATTTAGGG CATCTGAGCG TAAATCAGTT 
CGATTAGTGT TAGTGGCCAA TCAAATGATT AACGTACCTA ATTCACCATT AGTTAGCATG 
ATAAGGGTGA GTTCGGGTTT TGATGAAGCA GATAACTACA TTGTGGAACA AGTAGTGAAA 
GGGGACTTAG TGATTACTGC TGATATTCCT CTGGCATCTG ATGCGGTTGA TAAAGGCGCA 
TTAGTATTAA ACCCTCGTGG TACGGTGTAT ACCGCTGAAA ATATAAAGCA GATTCTGACG 
ATGCGTGACT TTATGGAAGA AATGCGCAGC AGTGGAATCC ATACTGGCGG TCCGAATAGT 
TTTTCGCAAA CGGATAAACA TGCATTTGCA CAAGCGTTGG ACAAATGGCT GGCGAGATTG 
ATCCCCAGCA AGATATAA
 
Protein sequence
MSVNEVEHFA VITNKIWVDA DACPNPVKEM LFRASERKSV RLVLVANQMI NVPNSPLVSM 
IRVSSGFDEA DNYIVEQVVK GDLVITADIP LASDAVDKGA LVLNPRGTVY TAENIKQILT 
MRDFMEEMRS SGIHTGGPNS FSQTDKHAFA QALDKWLARL IPSKI