Gene Sfri_1696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1696 
Symbol 
ID4277722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2002136 
End bp2002789 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content41% 
IMG OID638134481 
Producthypothetical protein 
Protein accessionYP_750385 
Protein GI114562872 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA CCTCACTAGA AGCTAGAGTT ATCGGATGCT TACTCGAAAA AGAACTCACC 
ACTCCTGATC AATATCCTCT GTCATTAAAT TCACTCGCCT TAGCATGTAA TCAAAAAAGC 
AGCCGCGAAC CAGTGCTATC ACTGAGCGAG TCTCAAGTAA AAACAGTATT AGACGATCTT 
ACCAAAAAAC GCTTACTGAG CGAGCAATCT GGTTTCGGTA GTCGAGTCGT AAAATATAAG 
CATCGCTTTT GTAATACTGA ATTCAGTGAA TTGCAGTTAA GCAGTGCTGA AGTAGCAATA 
ATTTGTGTGT TGTTATTGCG CGGCCCACAA ACACCAGGCG AACTCAAAAC TCGCACTAAT 
CGACTCCACG AATTCGCTGA TGTATCACAG GTTGAAACAG CATTATTGGC ATTAAGCCAA 
CGTGAAAAGC CTTTAGTTGT ACAACTTGCT CGAGAAGCGA ATAAACGTGA TTGCCGCTTC 
CTTGAGTGCT TTAGTGGCAA CGTTGATGAC TATGATGTGA ACAGTAGTGA TGCCATTGTC 
GTGTCGAATC ACACTCAACA AACGTTACAG CAAGACTCTA AGATTGTAGA ATTAGAACAA 
AGAGTTAAGT TGCTAGAACA AAAGCTAGCG CAATTAGAGT CGCTATTAAA CTAA
 
Protein sequence
MELTSLEARV IGCLLEKELT TPDQYPLSLN SLALACNQKS SREPVLSLSE SQVKTVLDDL 
TKKRLLSEQS GFGSRVVKYK HRFCNTEFSE LQLSSAEVAI ICVLLLRGPQ TPGELKTRTN 
RLHEFADVSQ VETALLALSQ REKPLVVQLA REANKRDCRF LECFSGNVDD YDVNSSDAIV 
VSNHTQQTLQ QDSKIVELEQ RVKLLEQKLA QLESLLN