| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1692 |
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| Symbol | rrmA |
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| ID | 4277718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1998454 |
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| End bp | 1999275 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638134477 |
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| Product | 23S rRNA methyltransferase A |
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| Protein accession | YP_750381 |
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| Protein GI | 114562868 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.653904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTATA TTTGCCCTAT TTGTAGCGCA CCATTAGTAC AACAACAAAA TTCTTGGCAA
TGTGAACAGC GCCATCAATT TGATTGTGCT AAAGAAGGTT ACGTTAATTT ACTGCCTGTA
CAAAAAAAGA AAACTAAAGA TCCCGGTGAT AACAAAGAAA TGATGATCGC TAGACGAGAG
TTTCTTAATC AAGGCTTTTA TCAACCGTTA AGCGACAAAG TAAATCAGTT AGCGCTAGAA
TTTGCTGGAG ATGCTACTAA GGTGCTCGAT ATAGGTTGTG GCGAAGGGTA TTACAGTCAT
CGATTATTCG AAACGTTGCA ATCTGTGGTT AACCCCCAGA GTGAGTTTTA TGGTTTAGAT
ATTTCTAAGT CTGCCATTCG CTATGCGGCT AAACGCTATT CTGGGTTACA TTTTTGTGTG
GCAAGTGCAT TTGAAATGCC TTTTGCTGAT GACAGTTTTG ATTTAGCGAT ACGTATTTAT
GCGCCGTCTA AAATTGAAGA GTTACAGCGG GTGATAAAAC CAACCGGAAT ACTCATTACC
GTTTCTCCTG GGCCGATGCA TCACTATGCG TTAAAAAAGA AAATTTATAG TGAACCCAAA
TTGCATCCAC AAGAGCCTAT GGTGTTAGAT GGCTTTACTT ACTTAGGACA CCAAGCGTTA
GCCTATTCAT TAACATTAAC TCGTGCGGAA GATATTGATC ATTTCCTTAA TATGACACCT
TACGCATGGA AATTGAGTGA TTCACAGAAG TCTCAGATAA TAGAGCAAGG GCTCGAGTGT
GAGATAGATT TTAAAATCGA AATTCATAAA CGCGAACAAT AA
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| Protein sequence | MSYICPICSA PLVQQQNSWQ CEQRHQFDCA KEGYVNLLPV QKKKTKDPGD NKEMMIARRE
FLNQGFYQPL SDKVNQLALE FAGDATKVLD IGCGEGYYSH RLFETLQSVV NPQSEFYGLD
ISKSAIRYAA KRYSGLHFCV ASAFEMPFAD DSFDLAIRIY APSKIEELQR VIKPTGILIT
VSPGPMHHYA LKKKIYSEPK LHPQEPMVLD GFTYLGHQAL AYSLTLTRAE DIDHFLNMTP
YAWKLSDSQK SQIIEQGLEC EIDFKIEIHK REQ
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