| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1665 |
|---|
| Symbol | |
|---|
| ID | 4277324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1970666 |
|---|
| End bp | 1971217 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638134450 |
|---|
| Product | putative adenylyl cyclase CyaB |
|---|
| Protein accession | YP_750354 |
|---|
| Protein GI | 114562841 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1437] Adenylate cyclase, class 2 (thermophilic) |
|---|
| TIGRFAM ID | [TIGR00318] adenylyl cyclase CyaB, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.248414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAG AACATTTTAA AGGTAAATAT GAAGTAGAGC TAAAATTTAG ATTGCAGTCA
AAATCTAAAT TTTTACAGAA ATTGGGCACG ATGTCTCACG AAGTAATGCT TCAAGATAAT
ATCGAATCCG ATTGGTACTT TGATACTTCA GAGCAACAAT TACAATTTCA AAATAAAAGT
GTTTGTATCC GTGAAATGGA ACCATCAGGG ATCAAGTTAT GGATCGTCAA AGGTCCTGAA
TTTGATCGCT GCGAAGCAAC TAATATCACA AATGCGAATT CAGCAAGAAG CATGTTAGAA
ACCATGGGTT ATCAGGTATC TTTGAAAGCA AAGAAAATCC GCAGTATTTA CTTTATTGGA
CAATACCATG TAACTCTAGA TTATCTTGAG GGTATTGGTC ATTTTTCTGA ATTTGCGATT
ATGACTGATG ATGAATCAAT GTTAGCTACT TACAAAGTTG AACTTGAAAA GTTAGCCAGT
CAGTTTGGTT TAAGCGCATC AGATTTAGAA ATAAAGTCTT ATCGCAAGTT GTTCACCGAA
CAAGCAGCCT AA
|
|---|
| Protein sequence | MNSEHFKGKY EVELKFRLQS KSKFLQKLGT MSHEVMLQDN IESDWYFDTS EQQLQFQNKS
VCIREMEPSG IKLWIVKGPE FDRCEATNIT NANSARSMLE TMGYQVSLKA KKIRSIYFIG
QYHVTLDYLE GIGHFSEFAI MTDDESMLAT YKVELEKLAS QFGLSASDLE IKSYRKLFTE
QAA
|
|---|
| |