Gene Sfri_1653 details

Gene Information

• Locus tag: Sfri_1653
• ID: 4277312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1959953
• End bp: 1960708
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638134438
• Product: hypothetical protein
• Protein accession: YP_750342
• Protein GI: 114562829

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000671597
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATGG AATTAATGGT TAAGGCTATG AAGGCGAAAG TGGGTAATCC GCTGCGCAAG 
TTGGTGTTAT TGAAATTGGC GGATAACGCG AACGACCAGG GTGAGTGTTG GCCTAGTTAT 
AATTACATTG CTGAGCAGTG TGAAATGAGC CGTCGTAGCG TTATGGACCA TGTTAAAAAA 
CTCGAAAAGT CGGGCTTTTT ACGTCGTGAA TATCGCAAGG GTGTTAAGGG TAATTCGTCT 
AATGTTTTTC ATCTGGATTT TGATGAAAAT ACAGGGTTAG GTGGTGAATC TGCTGCACTA 
CCTAGTGAAT CTGTCGCACT ACCCCCTAGT GAATCTGCTG CACTACCTAG TGAATCTGCT 
GCACTACCCC TAGTGAATCT CCTGCACCCA GAACCAGTCA CTTTAGAACC AGTCAATGAA 
TCTTTAAAAG ATGTAGTCAC CACATCGAAA AAATCACCTT TGGATTTTTC AAAGTGGCCT 
GCCTTGCCAA GTGACCAAGT TTTTAAAGAC TGGTTAGCCA TTCGCAAACA GAAAAAAGCC 
AAGTTAACCC AAACAGCGAT TAATCGCCTG GCACCGCATT TGGTGAAAGC GGTTGCTGCG 
GGTTGTTCGG TTGATGACGT TTTTGAGTTA TGCGCTTCAC GTTGCTGGAT TGGTTTTGAG 
TTCGATTGGT TAGTTAACGC TGGCTTGATT GCGAAACAAG CGATTAAGGC CGATTGGAGT 
CACTCAGTTT TTGACCCAGA GGATCCATTG ATATGA 

 

Protein sequence

MSMELMVKAM KAKVGNPLRK LVLLKLADNA NDQGECWPSY NYIAEQCEMS RRSVMDHVKK 
LEKSGFLRRE YRKGVKGNSS NVFHLDFDEN TGLGGESAAL PSESVALPPS ESAALPSESA 
ALPLVNLLHP EPVTLEPVNE SLKDVVTTSK KSPLDFSKWP ALPSDQVFKD WLAIRKQKKA 
KLTQTAINRL APHLVKAVAA GCSVDDVFEL CASRCWIGFE FDWLVNAGLI AKQAIKADWS 
HSVFDPEDPL I