| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1637 |
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| Symbol | |
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| ID | 4277296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1949720 |
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| End bp | 1950616 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134422 |
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| Product | cytidine deaminase |
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| Protein accession | YP_750326 |
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| Protein GI | 114562813 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0331465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC GTTTTTTAGA GAGCATTACT CAACTAGACA AGCCTTTGGC CAATGCGCTG
GTACCATTAT TACATGACCA ATTTTGCGGT CATATTGATG CAAGTCAATT TGCAGGCCTA
GTTAAGGCAA GCGGTAAAAC AGAGCAACAA GTGCTTATGG ATTTATTACC TATTGCCGCA
GCACTCGCTA ACCCACCGAT AAGTGAGTTT TATGTCGGCG CTATTGCAAA AGGTAGCAGT
GGCGACTTGT ACATGGGCGC TAATTTAGAA TTACCCGGTG AAGCGTTATT TCACAGTGTT
CATGCAGAAC AAAGTGCCAT CAGCCATGCA TGGTTGAGCG GTGAAACTGA AATTGTTGAT
ATTATTGTAA ATTTCAGCCC TTGTGGTCAT TGTCGTCAAT TTATGAACGA ACTGGTCAAT
GGTAGTAAGA TTAATATTCA CCTGCCAAAT CAAGAGACCC AAACATTAGC GCATTATTTA
CCTTATGCGT TTGGACCGTC AGACTTAGAT GTGACCGTGC CATTGCTATG TAAGCGCGAG
CAAGAATTTA ATTGTGATTC AGATGACCCA ATGATCATCG AAGCCATTGA TCAAATGGGC
CTCAGTTACG CACCCTACAC TAATAATAAT GCAGCTGTAG TATTAGAAAC CAACGATGGC
GCCACTTTCT GTGGTCGTTA TGCTGAAAGT GCGGCATTCA ATCCATCAAT GCAACCGATG
CAAATGGCTC TATCCAATTT AATCCGCAAT AACCGTCAAT ACAGCGAAAT AAAGCGCGCG
GTATTAGTTG AATCATCAGT AGGTAAAATT ACCTTGGTCG GCGCGGCTAT GGATGCTCTG
CATGCAATTG CACCGATTGA GCTTCAACAT ATGGTTGTAG AGCCATTGCT TGGATAA
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| Protein sequence | MQNRFLESIT QLDKPLANAL VPLLHDQFCG HIDASQFAGL VKASGKTEQQ VLMDLLPIAA
ALANPPISEF YVGAIAKGSS GDLYMGANLE LPGEALFHSV HAEQSAISHA WLSGETEIVD
IIVNFSPCGH CRQFMNELVN GSKINIHLPN QETQTLAHYL PYAFGPSDLD VTVPLLCKRE
QEFNCDSDDP MIIEAIDQMG LSYAPYTNNN AAVVLETNDG ATFCGRYAES AAFNPSMQPM
QMALSNLIRN NRQYSEIKRA VLVESSVGKI TLVGAAMDAL HAIAPIELQH MVVEPLLG
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